Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4811 |
Symbol | |
ID | 7970281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5130824 |
End bp | 5131297 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644795406 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_002946682 |
Protein GI | 239817772 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGACC TGGATCTGGA TCGCATCGAC CTTCGGCTGC TGAAGATTCT TCAGGAGGAC GGCCGCATCA CCAACCTCAA GCTGGCCGAG TTGGTGGCGC TCTCGCCCAC CGCCGTGCTG GCGCGGGTGC AGCGGCTCAC GCGCGAGGGT TTCATCCAGG GCTACGAGGC GCGGCTCGAT CCGCACAAGC TCGGGCGCGG GCTCACGGTG TTCGTCGAGA TCCTGCTCGA CCGCACCACG TCCAACGTGT TCGAGCAGTT CAAGGCCGCG GTGCAGGTGC GCGACGAGAT CATGGAATGC CACATGGTCG CGGGCGGCTT CGACTACCTG CTCAAGACCC GCATGGCCGA CATGGCGGCC TACCGCGAAT TCGCGGGCAC GGTGCTGTGG CAACTGCCGG GCGTGCGGGA GACGCGGACC TACGCGGTGA TGGAAGAAAT CAAGAGCAGC GCGCGGCTGC CGCTGGCCGT CTAG
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Protein sequence | MLDLDLDRID LRLLKILQED GRITNLKLAE LVALSPTAVL ARVQRLTREG FIQGYEARLD PHKLGRGLTV FVEILLDRTT SNVFEQFKAA VQVRDEIMEC HMVAGGFDYL LKTRMADMAA YREFAGTVLW QLPGVRETRT YAVMEEIKSS ARLPLAV
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