Gene Vapar_4807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4807 
Symbol 
ID7970277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5125122 
End bp5125775 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content73% 
IMG OID644795402 
Productputative fructose transport system kinase 
Protein accessionYP_002946678 
Protein GI239817768 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1072] Panthothenate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.969066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCT CTCCCGAGCA ACAACTTCCG TCCATTCCCG AAGACGCCCT CGCGCGCCTG 
CAGGCCCTGA TGGTCGACGG GCGGCGCAAG CTGCTGGGGC TGGTCGGCGC GCCCGGCGCG 
GGCAAGTCCA CGCTTGCGCT GGCGCTGCTG CGGGCCGTGG GCGCCGGGCG CGCGCAGGTC 
GTGCCGATGG ACGGCTTCCA CCTGGCCAAC GTCGAGCTGC AGCGGCTCGG CCGCGCCGGC 
CGCAAGGGCG CTCCCGACAC CTTCGACAGC GCCGGCTACG TGGCGCTGCT GCAGCGGCTG 
CGCATGCAGG GGCCGCACGA CCCGATCGTC TATGCGCCCG AGTTCCGCCG CGAGATCGAG 
GAGCCGATCG CCGGCGCCAT CGCGGTGCTG CCGCAGACCC AATTGGTCAT CACCGAGGGC 
AACTATCTTC TGCACGACGA CGGCCCCTGG GCCGGCGCGG CCGCCATGCT CGACGAGGCC 
TGGTACGTCG ACATCGACGA CGCGGTGCGC GAAGAGCGCC TGCTGAAGCG CCACCAGCAG 
TTCGGCCGCA GCGCCGAGGC CGCGCGCGAC TGGGTGGCCG GCACCGATGC ACCCAACGCA 
CGCCTGATTG CCGCCACGCG CGGGCGGGCG CACCACGTGC TGCACTGGTC CTGA
 
Protein sequence
MSISPEQQLP SIPEDALARL QALMVDGRRK LLGLVGAPGA GKSTLALALL RAVGAGRAQV 
VPMDGFHLAN VELQRLGRAG RKGAPDTFDS AGYVALLQRL RMQGPHDPIV YAPEFRREIE 
EPIAGAIAVL PQTQLVITEG NYLLHDDGPW AGAAAMLDEA WYVDIDDAVR EERLLKRHQQ 
FGRSAEAARD WVAGTDAPNA RLIAATRGRA HHVLHWS