Gene Vapar_4805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4805 
Symbol 
ID7970275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5123804 
End bp5124295 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content76% 
IMG OID644795400 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002946676 
Protein GI239817766 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCCA ATCTCGACTC CGCCGACGCG CTGCAGTGCG CCGCGCGCCT GCGCACCGCG 
GTGTCGCAGT TCTCGCGCCA GCTGCGCAGC GGCCCGGCCG CGCCCGACGG CCCGAGCGTG 
GCCAAGCTCA GCGTGCTGGG CCAGCTGCAC CGGCACGGGC CGTGCACGCC CACCGCGCTC 
GCGGCGCATG AACGCGTCAA GCTCCAGTCG CTGACCCGGC TGCTGGCCGA ACTGGAAGCC 
GAGGGCTGGA TCGGCCGCGC GCCGCATGCC ACCGACGGGC GCCAGTGGCT GCTGTCGCTC 
ACGCCCGAGG GCCTGCGCCG GCTCAAGGCG CTGATGCGCT CGCGCGAGGC CGCCCTGGCC 
CGCGCCATCG GCGCCACGCT GGGCGCCGAA CAGCGCGCGC TGCTGCTGCA GGCCTGCGGG 
CTGATTGACC GCATTGCCGG TGCGCTCGAA GAGGGCGGCG AGCCCTCGAC GGGCGCGGCG 
CGGCCGCGAT GA
 
Protein sequence
MASNLDSADA LQCAARLRTA VSQFSRQLRS GPAAPDGPSV AKLSVLGQLH RHGPCTPTAL 
AAHERVKLQS LTRLLAELEA EGWIGRAPHA TDGRQWLLSL TPEGLRRLKA LMRSREAALA 
RAIGATLGAE QRALLLQACG LIDRIAGALE EGGEPSTGAA RPR