| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4804 |
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| Symbol | |
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| ID | 7970274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5122749 |
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| End bp | 5123807 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644795399 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_002946675 |
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| Protein GI | 239817765 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4129] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGA TGGCACCGGC CCTGCAGCGC ATTGGCGGCT TCTGGCGCGA GGGCCGCTGG
CGCGCGGGCG CGCAGCTGGC GGCCGCAGTG GCGCTGGCAT GGCTGGTGGC CGTGGCGATG
CGGCTGCCCG AAAGCTTCTG GGCCGTGATG AGCGTGCTGA TCGTCATGCG GCCGAGCGCC
GGCGGCACGC TCGGCGCGGG CTGGGAACGC CTGCGCGGCA CGGCCGCCGG CGCGCTCTGC
GGACTCGCGG GGGTCTACCT GCAGCACCTC GGCGCGCCGG TGCTCGCGAC CACGCTGGCC
ACCGTGATGC TGCTGGCCTT TGCCGGCGCC GCGCTGCCGG GTTTTCGCAG CGCGCCGGTG
GCCGCGCTGC TCATTCTTTC GGCCGGCGCC ATCCCCGGCC ACTCGGCGCT CGACGTGGCG
CTGCTGCGCA TGCTGCAGAT CGGCATCGGG GTGGGCGTGG CGCTGGCGGT GGCGCTCGTC
GCGTCGGAGT ACCGCGCGGG TCCGCGCTTC GATGCGGGTT GTGCCGCGTT GCTGCGCGGC
ATGGCGAAGC GCCTGGCCAC GCTGGCCGCA CTCGGCCCGG GCGGCGCCGC CGGGCTGCCT
GCCGAGTCCG AGGCCGAGCG TGCCAATGCC GCCGCGCGCG CGGCGCTCGC CCGGCTGGCG
CTGCTCGCGG GCAGTGCCGA CCTGGAAGCC CGCTGGTGGC GCCGCGGCAC TGCCGTGCCG
GCGGCGCAGT CCTGCCGCAG CAAGGTGCGG CTCGCGGCGC GGATCTTCCA GGATGCCGCC
ATGCTCGAAC GCATGTTCCG TCGGGCACCG CCTGGCGACG CCGCGTGGCA GGACACCGCC
CGGGCCGCGG CCGCCGCGCT CGCCGCCATG GCCGATGCGC TCGATGGCCG GGGCGCGCCC
GATCTTGCGA AGCTTGCGCA GCTCGCACGC CGGCATGAGT CGCCGGGCGC CTCGTCCGCC
TTGCTGCTGC TGGCGGCGCC GGTGTGCCTG CTGCTCGAAG ACCTGCAGCG CATGCAGCGC
TGCGTGGCGG CGGCGGCATC CGCGGCACCC ACGGCCTGA
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| Protein sequence | MTPMAPALQR IGGFWREGRW RAGAQLAAAV ALAWLVAVAM RLPESFWAVM SVLIVMRPSA
GGTLGAGWER LRGTAAGALC GLAGVYLQHL GAPVLATTLA TVMLLAFAGA ALPGFRSAPV
AALLILSAGA IPGHSALDVA LLRMLQIGIG VGVALAVALV ASEYRAGPRF DAGCAALLRG
MAKRLATLAA LGPGGAAGLP AESEAERANA AARAALARLA LLAGSADLEA RWWRRGTAVP
AAQSCRSKVR LAARIFQDAA MLERMFRRAP PGDAAWQDTA RAAAAALAAM ADALDGRGAP
DLAKLAQLAR RHESPGASSA LLLLAAPVCL LLEDLQRMQR CVAAAASAAP TA
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