| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4792 |
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| Symbol | |
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| ID | 7970262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5104430 |
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| End bp | 5107726 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795387 |
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| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_002946663 |
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| Protein GI | 239817753 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCTCCA AAGTCCTGAT TGCCAACCGC GGAGAGATCG CGGTGCGCCT GGTGCGTGCG
CTGCGCGACC TCGGCATTGC GAGCGTGGCG GTGCATGCGC GCGACGATGC CTCGGCATTG
CATGTGCAGC TGGCCGACGT GGCCGTCGCG CTCGATGCGG CCGGGCCCTC GGCCTACCTC
GATGTTGCCG CGCTGATCGG CGTAGCAAAG GCGCAGGGCT GCGACGCGGT GCATCCCGGC
TACGGCTTCC TGAGCGAACG CGCGGACTTT GCACAGGCCT GCGCGGAGGC GGGGCTGGTC
TTCATCGGCC CCGCACCCGA GCAGCTGGCG CTGTTCGGCG ACAAGGCGCG TGCACGCGCA
CTCGCCACCC AGTGCGACGT TCCCGTGATG CCCGGCAGCG CCGGCGCCGT GACGCTCGCG
CAGGCGCAGA CCTTCTTTGC CGAGCAGCAG GCGCAGGGCG CCGCGGGCGT GATGATCAAG
GCCATCGGCG GCGGTGGCGG GCGCGGCATG CGCGCTGTCA TGAATGCGGA CGAACTCTCC
GAAGCACATG CGCGCTGCAT GTCCGAGGCC AAGGCGGCCT TCGGCGTCGA AGGCGTGTAC
GTGGAGCGCC TGATGCGCAA TGCGCGCCAT ATCGAAATTC AGGTGCTCGG CGACGGCCAG
GCCGTGGCCA GCCTCGGCGA GCGCGAGTGC ACCCTGCAGC GGCGTTTCCA GAAGCTGGTG
GAGATCGCGC CGAGCCCCTC GCTGCCCGAT GCGCTGCGCA CGTCCATCAC GCAGGCCGCG
CTGCGCATGG CCCAGGCCGC GGGCTACCGC AGCCTGGGCA CCTTCGAATT CCTCGTCGAT
GCACAGTCGC CCACGCTCCC TTTCGTCTTC ATCGAGGCGA ACCCGCGGTT GCAGGTCGAG
CACACGGTGA CGGAGGCCGT GACGGGCCTG GATCTCGTGC AGCTGCAGAT GGCGGTGGCA
GCCGGCCAGT CCTTGAAGGC GCTCGGCGTG GAAGCCGGCC GCACGGCGGT GCAGCGCGGG
TTTGCAGTGC AATGGCGCAT CAACGCCGAG ACGCTCGATG CCCATGGCAG CGCACGGCCC
TCGGGCGGCA CGCTCGCGCG CTTCGACCTG CCGAGCGGGC CCGGCGTGCG CGTCGACACG
CACGGCTATG CAGGCCTTGC GCCATCGCCG CACTACGACA CGCTGCTTGC CAAGCTGATC
GTGCATTCGC CGTCGCCGCG TTTTGCCGAC GCGCTGCGCC GCTCGCTGCG CGCGCTGGAC
GAATGCCGCA TCGACGGCAT CGCGACCAAT ATTGCATTGC TGCGCGCCAT TGCGGCGCGG
CCCGAGTTCG CAAGCCAGGC GGTGCACACG CGCTTCGTCG AAGCGCATCT GGGCGACCTG
CTGGCCGCCG CGGCATCGCT TGAAAAGCAT GCGAAGAAGA TCGCACCTGT CGATGCGCAG
GCGGCGGCAA TCGAAAACGA CGATGCGGAC GGCCTGGCGA TCAAGGCGCC GATGCCCGCA
AAGCTGGTGC AGTTCGAAGT GGCGGTGGGC GATGTGCTGC CTGCCGGTGC GCAGCTCGGC
GTGCTCGAGG CCATGAAGAT GGAGCACCTG CTGCACGCGC CGGTCGCGGG CCGCGTGGTT
GCGCTGCTGG CCGAACCCGG CGACTACCTC GTCGAAGGCC AGTCGCTGGT GCGGCTGGAG
CCGGTCGATG CCGAGGCGGC CGCAGCCGAG GCGCGCACCG AACAGGACCT CGATGCGATC
CGCCCCGACC TGCAGAAGGT GATCGACCGC CATGCCTTCA CGCTCGATGC CAACCGCGGC
GCGGCCGTGG CCAAGCGGCA TGCGCAGGGC GGGCGCACCG CGCGCGAGAA CATCGCTGAC
CTGTGCGATA CCGCCGCCGA TGCCGGCAAC TTCATCGAAT ACGGCGCGCT CGCCATCGCC
GCGCAAACGC GCCGCCGCAC GCTCGAAGAC CTGGTCGCCA ACACGCCGGC CGACGGCATG
GTGACGGGCC TGGGCAGCAT CAACGCGAAG CTGTTCGGCC CCGAGGCCTC GCGCTGCGCG
GTGCTGGCCT ACGACTACAC GGTGCTGGCC GGTACGCAGG GCATGCGCAA CCACCACAAG
ACCGACCGCA TGCTGTCGAT CGCGCACCAG CTGAAGCTGC CGGTGGTGCT GTTCGCCGAA
GGCGGCGGCG GGCGGCCGGG CGATACCGAT ATGCCGATCG TCGCGGGCCT CAACAACCAC
ACCTTCAGCC AGTTCGCGGC GCTCTCGGGC AAGGTGCCGG TGGTGGGCAT CGTGCATGGC
CGCTGCTTCG CGGGCAACGC GGCGCTGCTG GGCTGCGCCG ACGTGATCAT TGCCACGCGC
GGCAGCAACA TCGGCATGAG CGGCCCCGCG ATGATCGAGG GCGGCGGGCT CGGCAGCTTC
GCGCCCGAGC AGATCGGGCC GAGCAGCGTG CAGTCGCGCA ACGGCGTGAT CGACGTCCTG
GTGGAAGACG AGGCCGCGGC GGTGGCTGCG GCAAAGCAAT ACCTTTCGTA TTTCCAGGGG
CCGGTGAGCG ACTGGCAATG CGCCGACCCG CGCGCGCTGC GCCACGTGGT GCCCGAGAAC
CGGCTGCGCG TGTACGACGT GCGCGCCGCG ATGCGCGGCG TGGCCGACAC GGGCTCGCTG
CTCGAGCTGC GAGTGGGCTT CGGCGCCGGC ATCGTCACTG CGCTCGCGCG CATCGAGGGC
AAGCCGGTGG GGCTGATGGC CAACAACCCG CACCACCTGG GCGGCGCGAT CGACGTGGAG
GCGGCCGACA AATCGGCGCG CTTCATGCAG CTGTGCAATG CGCACGGCTT GCCGATCGTC
TCGCTGTGCG ACACGCCCGG CTTCATGGTC GGCCCCGAGA TCGAGGCGCA GGCGCAGGTG
CGCCATGTCT GCCGCATGTT CATGGTGGCC TCGCACCTGC GCGTGCCCTT CTTTGCGGTG
GTGCTGCGCA AGGGCTACGG CCTGGGCGCG CAGGCCATGA CGGCCGGCGG CTTCGATGCG
CCGGTGTTCA CGGTGGCCTG GCCGACCGGC GAATTCGGCG CGATGGGGCT CGAGGGCGCG
GTGCGCCTGG GCTATCGCAA GGAGCTGGCG GCGGCGGCCG AGGGCGCCGA GCGCGACGCG
CTGTTCAAGA CGCTGGTGGC GCAGCAATAC GCCAATGGCG AGGCGATCCA CATGGCGCAG
ACGCTCGAGA TCGATGCGGT GATCGATCCC GCCGAAACCC GCACCTGGCT GGTGCGCGGA
CTCGCCTCCG CGGGGCGCTC TGCGCAAACC GCGTCGCCCT ATGTAGACAC TTGGTAA
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| Protein sequence | MFSKVLIANR GEIAVRLVRA LRDLGIASVA VHARDDASAL HVQLADVAVA LDAAGPSAYL
DVAALIGVAK AQGCDAVHPG YGFLSERADF AQACAEAGLV FIGPAPEQLA LFGDKARARA
LATQCDVPVM PGSAGAVTLA QAQTFFAEQQ AQGAAGVMIK AIGGGGGRGM RAVMNADELS
EAHARCMSEA KAAFGVEGVY VERLMRNARH IEIQVLGDGQ AVASLGEREC TLQRRFQKLV
EIAPSPSLPD ALRTSITQAA LRMAQAAGYR SLGTFEFLVD AQSPTLPFVF IEANPRLQVE
HTVTEAVTGL DLVQLQMAVA AGQSLKALGV EAGRTAVQRG FAVQWRINAE TLDAHGSARP
SGGTLARFDL PSGPGVRVDT HGYAGLAPSP HYDTLLAKLI VHSPSPRFAD ALRRSLRALD
ECRIDGIATN IALLRAIAAR PEFASQAVHT RFVEAHLGDL LAAAASLEKH AKKIAPVDAQ
AAAIENDDAD GLAIKAPMPA KLVQFEVAVG DVLPAGAQLG VLEAMKMEHL LHAPVAGRVV
ALLAEPGDYL VEGQSLVRLE PVDAEAAAAE ARTEQDLDAI RPDLQKVIDR HAFTLDANRG
AAVAKRHAQG GRTARENIAD LCDTAADAGN FIEYGALAIA AQTRRRTLED LVANTPADGM
VTGLGSINAK LFGPEASRCA VLAYDYTVLA GTQGMRNHHK TDRMLSIAHQ LKLPVVLFAE
GGGGRPGDTD MPIVAGLNNH TFSQFAALSG KVPVVGIVHG RCFAGNAALL GCADVIIATR
GSNIGMSGPA MIEGGGLGSF APEQIGPSSV QSRNGVIDVL VEDEAAAVAA AKQYLSYFQG
PVSDWQCADP RALRHVVPEN RLRVYDVRAA MRGVADTGSL LELRVGFGAG IVTALARIEG
KPVGLMANNP HHLGGAIDVE AADKSARFMQ LCNAHGLPIV SLCDTPGFMV GPEIEAQAQV
RHVCRMFMVA SHLRVPFFAV VLRKGYGLGA QAMTAGGFDA PVFTVAWPTG EFGAMGLEGA
VRLGYRKELA AAAEGAERDA LFKTLVAQQY ANGEAIHMAQ TLEIDAVIDP AETRTWLVRG
LASAGRSAQT ASPYVDTW
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