| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4787 |
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| Symbol | |
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| ID | 7970257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5099434 |
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| End bp | 5100204 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795382 |
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| Product | protein of unknown function DUF399 |
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| Protein accession | YP_002946658 |
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| Protein GI | 239817748 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3016] Uncharacterized iron-regulated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.401942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTTG CGGGTTGCAC CGCGTTTCAG GACGGCCCCG ATGCGCCGGT GGCGCGGCGC
GCGGCGGCGC TGCTGCCGGT GGACGCGCTG ATCCTGGGCG AGCAGCACGA CGCCCCCGAG
CACCATGCGA TCGAGCGCGA AACCGTCGAG GCGCTGGCCA GCCGGGGCCA GCTGGCCGCG
CTGCTGCTCG AAATGGCCGA GGAAGGCCAC AGCACCCTCC GCCTCGACGC CGCGGCCACC
GATGCGCAGG TGCGCGACGC GCTGGCCTGG AACGACAAAG CCTGGCCCTG GCAGAGCTAC
GGTCCCGTGG TGATGGCCGC GGTGCGCGCC GGCGTGCCCG TCGTCGGCGC CAACCTGCCG
CGTTCGCGCA TGAAGAACGC CATGGCCGAC GTCTCGCTCG ACGTGCAGCT CAACGGCGAG
GCCTACACCG CGCAGCAGGA CGCCGTGCGC GAAGGCCACT GCAAGCTGCT GCCCGAGCCG
CAGATCGTGC CGATGACGCG CATCCAGGTC GGGCGCGACC GCGCCATGGC GCAGGCCATC
GTCAAGGCCC GCCAGCCGGG CAAGACGGTG CTGCTGGTCA GCGGCGCGGG CCATGCCACC
AAGGTGCTGG GCGTGCCGCA GCACCTGCCG ACCGACGTGT CGGTCAAGTC CGTGCGGCTG
CAGGCCGGCG AATCACCGGA CGAGGAGCAG GACAAGGAAG CCTACGACGC CGTCTGGCGC
ACGGCCCCGC TGCCGCCGAA GGACTACTGC GCGGACATGC GCACCCGATA G
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| Protein sequence | MALAGCTAFQ DGPDAPVARR AAALLPVDAL ILGEQHDAPE HHAIERETVE ALASRGQLAA
LLLEMAEEGH STLRLDAAAT DAQVRDALAW NDKAWPWQSY GPVVMAAVRA GVPVVGANLP
RSRMKNAMAD VSLDVQLNGE AYTAQQDAVR EGHCKLLPEP QIVPMTRIQV GRDRAMAQAI
VKARQPGKTV LLVSGAGHAT KVLGVPQHLP TDVSVKSVRL QAGESPDEEQ DKEAYDAVWR
TAPLPPKDYC ADMRTR
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