| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4783 |
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| Symbol | |
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| ID | 7970253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5095332 |
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| End bp | 5096402 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795378 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_002946654 |
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| Protein GI | 239817744 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.155683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG CCACCCTGAA GGACGGCTCG CGCGACGGCC AGCTCGTCGT CGTCTCGCGC
GACCTCACGC TCGCCCACTA CGCCACTGGC ATCGCCAGCC GGCTGCAGCA GGTGCTGGAC
GACTGGGGCT TCATGAGCCC GCAGCTGCAG GACCTGTACG ACGCGGTCAA CACCGGCCGC
GCACGCCATT CCTTCCCGTT CGACCCCGCC CAGTGCATGG CGCCGCTGCC GCGCGCCTAC
CAGTGGGCCG ACGGCTCGGC CTACCTGAAT CACGTCGAGC TGGTGCGCAA GGCGCGCAAT
GCCGAAGTGC CCGAGAGCTT CTACCAGGAC CCGCTGATGT ACCAGGGCGG CAGCGACGAC
TTCCTCGGCC CGACAGACGA CGTGGTCGTG CCCAGCGAAG CCATGGGCAT CGACTTCGAG
GCCGAGATCG CGGTGATCAC CGGCGACGTG AAGATGGGCG CCACGCCCGA CCAGGCGCTC
GACGGCATCC GCCTGGTGAT GCTGGCCAAC GACGTGAGCC TGCGCAACCT GATCCCTGCC
GAGCTGGCCA AGGGCTTCGG CTTCTTCCAG AGCAAGCCGG CCACCGCCTT CAGCCCCGTG
GCCGTGACGC TCGACGAGAT CGGCGAAGCC TGGCAGCACG GCCGCGTGCA CCTCACGCTG
CAAAGCAGCT GGAACGGCCG CAAGGTCGGC ATGTGCGACG CCGGGCCCGA GATGACCTTC
CATTTCGGCC AGCTCATCGC CCACATCGCC AAGACGCGCA ACGTGCGCGC CGGCAGCATC
GTCGGCAGCG GCACCGTGAG CAACAAGGGC GTGGAAAAGA GCGGCCAGAT GGACTGGCCC
AAGGGCTATT CGTGCATTGC CGAGAAGCGC TGCATCGAAA CCATCCAGGG CGGCGAGCCC
GTGACCGAAT TCATGAAGTT CGGCGACACC ATCCGCATCG AGATGAAGGG GCTCGATGGC
CGCTCGCTGT TCGGCGCGAT CGACCAGGAA ATCGTGTCGG CGGCGGGGCG GGCGAAGGTG
GCGCCGGTGT CGCTGGCGAA CCCGCAGGAC GACGACGGCG CCGAAGGCTG A
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| Protein sequence | MKLATLKDGS RDGQLVVVSR DLTLAHYATG IASRLQQVLD DWGFMSPQLQ DLYDAVNTGR
ARHSFPFDPA QCMAPLPRAY QWADGSAYLN HVELVRKARN AEVPESFYQD PLMYQGGSDD
FLGPTDDVVV PSEAMGIDFE AEIAVITGDV KMGATPDQAL DGIRLVMLAN DVSLRNLIPA
ELAKGFGFFQ SKPATAFSPV AVTLDEIGEA WQHGRVHLTL QSSWNGRKVG MCDAGPEMTF
HFGQLIAHIA KTRNVRAGSI VGSGTVSNKG VEKSGQMDWP KGYSCIAEKR CIETIQGGEP
VTEFMKFGDT IRIEMKGLDG RSLFGAIDQE IVSAAGRAKV APVSLANPQD DDGAEG
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