| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4773 |
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| Symbol | |
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| ID | 7970243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5084819 |
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| End bp | 5085727 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795368 |
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| Product | protein of unknown function DUF461 |
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| Protein accession | YP_002946644 |
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| Protein GI | 239817734 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.917664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATC CGCGCACCAT CCTCAAGACC GCCGCCGCCT GCGCCCTGCT GGCAGGCACG
GCCGCCGCCT GCGCCCACGT CACGCTGCCG CGCGGCGGCG CCACCGTCGG CAGCGACTAC
AACGCGGCCT TCCGCGTCGG CCATGCCTGC GAAGGCGCCA AGGCCACTAC CGGCCTGGCC
GTGCGCCTGC CCAAGGGTTT CCTGCTGAGC GACGCCCAGG CGCGCAAGGG CTGGAAGCTC
GACGTGCAGA AGAACGCCGG CGACGGCGAA GTGCGCTGGA CCGCCGAAAA CCCGCAAGCG
GCGCTGCCCG CCGGCGAGCG CGCCGAGTTC GTGCTGCGCG GCAAGGTGCC GGGCACGCCC
GGCCCGCTGT GGTTCAAGGT GCTGCAGACC TGCGACGTGG GCAGCATCGA TTGGGCGGAA
GTGCCGGCCT CGGGCACTTC GACCACCGGG CTCAAGAGCC CTGCCGCCAG GCTCGACGTG
GTGGCGCAGG GCGTGGCCAC GGTCGACGTG CGCGACGGCT GGGTGCGCCA GTCGGTGCCG
GGCCAGAGCG GCACCGGGGC CTTCATGAAA CTCACCGCGC CCACGGGCGC CAGGCTGGTC
GGCATCACGA CGCCGGCCGC CGGCGTGGCC GAGGTGCACG AGATGAAGAT GGAAGGCGAC
ACCATGAAGA TGCGCGAACT GCCGGGCGGC CTCGACCTGC CTGCCGGCCA GACCGTCGAG
CTCAAGCCGG GCGGCTACCA CGTGATGATG ATGGACCTGA AGCAGGCGCT GGCCAAGGGT
TCGACCGTGC CGATGACGCT GCGTTTCGAG GATGCCAAGG GCCAGAAGAG CTCGCTCGAG
CTGAACCTGC CGGTGGGCGC GCCCGAAGGA GCCGACACCG CCGCGCCGGC CCATCAGCAC
AAGCACTGA
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| Protein sequence | MNHPRTILKT AAACALLAGT AAACAHVTLP RGGATVGSDY NAAFRVGHAC EGAKATTGLA
VRLPKGFLLS DAQARKGWKL DVQKNAGDGE VRWTAENPQA ALPAGERAEF VLRGKVPGTP
GPLWFKVLQT CDVGSIDWAE VPASGTSTTG LKSPAARLDV VAQGVATVDV RDGWVRQSVP
GQSGTGAFMK LTAPTGARLV GITTPAAGVA EVHEMKMEGD TMKMRELPGG LDLPAGQTVE
LKPGGYHVMM MDLKQALAKG STVPMTLRFE DAKGQKSSLE LNLPVGAPEG ADTAAPAHQH
KH
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