| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4772 |
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| Symbol | |
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| ID | 7970242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5083057 |
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| End bp | 5084808 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795367 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_002946643 |
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| Protein GI | 239817733 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCT TCTACGCGCT CTTTGGCCGA AGCATTGCGC TTCTTGTCCT TGTCCTGCAG
GGCGCCTGCG CACAACTGCC CGAGCACGTC GACCGGCCGG TCTCGACCGC GCTCGCCTCG
CCCAACGGCA CCGCGCTGGA GGCCCTGGTG CAGCAGCGGC GCAAGGCCGA CGGGGCGCGC
TTCGAGTCCG GCTTCCTGCT GCTCGCGGGG CCGCCCGCCG CCTACGGCAG CCGGCTCGCG
CTGATCGAAG GCGCGCAGAA AACGCTCGAC CTGCAGTACT ACGCCATCCA TGCCGACGCC
AGCACCGGCC GGCTGGTGCG GGGACTTCGA GCGGCGGCCG AGCGCGGCGT GCGGGTGCGG
ATCCTGCTCG ACGACCTGCA CAGCACCGGG CGCGATGCGC TGGTGCTGGG CCTGGCTTTC
GTGCCGAACA TCGAGATGCG CCTGTTCAAC CCGCTGGCCG GCGCGCGCGG GACTTCGCTG
GCGCGCGTCT TCAACTCGAT CGGCGATGCC TCGCGGATCC AGCAGCGGAT GCACAACAAG
CTCTTCCTCG CCGACAACGT GCTCGGCGTC ACCGGCGGGC GCAACCTGGG CGACGCCTAC
TTCGGCAATG CGTTGAAGGG CAACTACATC GACGTCGACA TCCTGGCGGC GGGGCCGATC
GTGCGGGACC TGTCGCGCAG CTTCGACAGC TACTGGAACA ACGAACGCGC CTACCCGGTC
CAGTCGCTGG TCAAGCGCAG CGAGCTGGAG GCCATCCGCG AGCGAGCGCA GCAGGCCGAC
CGGGAACTGG CCGACGAGTC GGCCCGGGCG CAGAACTCGC CGCCGCCGGC CCCCCCGCCG
CCCGCGCCCG GAACAGAACC GAAGGACGGC GCCGCCCCGA CGCCGGCACA GCTCGCCCGC
GCCTGGGACG AAAAGCCGAT GGACCTGCGA ACCGCCCGTT TCGTCTGGGC GCCCGCGGTG
ATGCTCGCCG ACCAGCCCGG AAAGATCCCG GCCGACAAGG GCGCCGAGAA GACGAGGGCG
CCGGGCCTGG TCGTGAGCCA GCCCGGGGAC GCCGCCAGCT CGTCGCGGCG CGCGGCGGCG
CTCGAAGCCA GCTCCGACCT GGCCGCGGGC AGCGACACGG TGGTCGAAGG CCTGCTGCAG
CTGATCGGCC AGGCCCGCAG CGACCTGCTC ATCATCTCGC CCTATTTCGT GCCCGGCCCG
GACATGATGC AGGCCTTTGC AGCGGCGCGG GGGCGGGGCG TGCGCATCCG CGTGCTGACC
AACTCGCTGT CGTCGAACGA CGCGCCGGTG GCGCATGTCG GTTACTCCCG CCATCGCGAG
GATCTGCTCA AAGTGGGCGT GGAGCTCTAC GAGCTGCGCA GCGAGCAGGC CAGCGTCGGC
AATGCCTTCG GCTCGTCGGG CAGCGGCGGC AGCCTCGGCG AATCGCGCTC GATGCTGCAT
TCGAAGGTGC TGGTGATGGA CGGCCGGCTG CTGGTGGTCG GCTCGATGAA CCTGGACCTG
CGCTCGCAGC TGCAGAACAC CGAGATCGCG CTGCTCGTGC GAAGCGCCGA GCTCTCGCGC
GCGGCCTCCG CCCAGATCGA GCGCGGCATG CGCGAGGGCT CATGGCGGGT CGAGCTGGAC
GGCGGCTCGC TGGTCTGGCG GGCGCCCGAA GGCAGCGGGC TGAAGGACAC CTCCACCGAG
CCCGACGCCA GCCTGACCCT GCGCCTGCTG CTGCGGCTGT TCGGTCCGCT GGCGCCGGAC
CAGCTGCTGT AG
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| Protein sequence | MSSFYALFGR SIALLVLVLQ GACAQLPEHV DRPVSTALAS PNGTALEALV QQRRKADGAR
FESGFLLLAG PPAAYGSRLA LIEGAQKTLD LQYYAIHADA STGRLVRGLR AAAERGVRVR
ILLDDLHSTG RDALVLGLAF VPNIEMRLFN PLAGARGTSL ARVFNSIGDA SRIQQRMHNK
LFLADNVLGV TGGRNLGDAY FGNALKGNYI DVDILAAGPI VRDLSRSFDS YWNNERAYPV
QSLVKRSELE AIRERAQQAD RELADESARA QNSPPPAPPP PAPGTEPKDG AAPTPAQLAR
AWDEKPMDLR TARFVWAPAV MLADQPGKIP ADKGAEKTRA PGLVVSQPGD AASSSRRAAA
LEASSDLAAG SDTVVEGLLQ LIGQARSDLL IISPYFVPGP DMMQAFAAAR GRGVRIRVLT
NSLSSNDAPV AHVGYSRHRE DLLKVGVELY ELRSEQASVG NAFGSSGSGG SLGESRSMLH
SKVLVMDGRL LVVGSMNLDL RSQLQNTEIA LLVRSAELSR AASAQIERGM REGSWRVELD
GGSLVWRAPE GSGLKDTSTE PDASLTLRLL LRLFGPLAPD QLL
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