| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4762 |
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| Symbol | |
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| ID | 7971772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5059718 |
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| End bp | 5061307 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795347 |
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| Product | apolipoprotein N-acyltransferase |
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| Protein accession | YP_002946633 |
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| Protein GI | 239817723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
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| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.219906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGC CGGCAGCGGC CACGCTCCGC ACGTCTCCCG CCTTTTCCGC CGTGGGCCTG
CTGCGCCTGC TGGCCTTTGC CTTCGCGGGC CTCGCCCAGG CCGCGGCCAT TGCCTGGCCT
GCGAACGGCC GGCCGCTGTG GTGGCTGCAG CTTGTTTCGC TGGCGGTGCT CGTCGGACTG
CTGGACTGGC TGCGCGCCGA GGGTGCGGGC TGGCGCCGCG CCGGGCTGCA TGGCTGGCTT
TTCTCGACCG CCTGGCTCAC CGGCAGCTTC TGGTGGCTAT TCATTTCGAT GCACACCTAC
GGCGGGCTGC CGGCGCCGCT CGCGGCCATT GCGGTGCTCT CGCTCGCGGC CGCGCTCGGG
CTCTATTACG CGGTGGCCTG CGCCTGGTTC GTCGTTCGCG GGCCGCGCGG GCCGGTGGCC
GGGGCGCTGG TGTTCGCCGC GCTGTGGACG CTGGCCGAGC TCGTGCGCGG CAGCTGGTTC
ACCGGCTTTC CCTGGGGCGC CGGCGGCTAT GCGCACGTCG AGGGGCCGCT GGCGGCCTGG
GCGCCGTGGA TCGGCGTGTA CGGCATCGGC GCGGTGGCCG CGCTGGTGGC CGCGCTGGTG
GCGCTGACCC GGCCCGCGCG CGGCATCGCG CTCGCGCAGG CCCTGGCGCT GGTCGCCGCT
GCATTCGCCG CGCCGCACCT CGTGGCACCG CTGTCCGGCG ACGCGCAGGG CGCCAGGGGT
TCGAGCGGCA AGCTGCAGCT CGCGCTGCTG CAGGGCAACA TCCCGCAGGA CGAAAAATTC
ATTCCGGGCG GCGGCATCGA CCTGGCGCTG CGCTGGTATG GAGAGCAGCT GCGCGATGCC
AAGGCCTCGC TCGTGGTGAC CCCCGAAACC GCACTGCCGC TGCTGCCGCA GCAACTGCCC
GAGGGCTACC TGGAGGCGAT CCAGGCGCGC TACAGCCAGG GCACGCAGGC GGCCATCGTC
GGCCTGCCGC TGGGCCGCCA GGGCACCTAC AGCAACGCGG TGCTCGGCTT CCAGCCCGGT
GCGGCGCAGC CCTACCGCTA CAGCAAGCAC CACCTGGTTC CGTTCGGCGA ATTCATTCCG
CCGGGCTTTC GCTGGTTCAT CCGCATGATG AACATCCCGC TCGGCGACTT CGCGCGCGGC
GGCCTGGCGC AGGCGCCCTT TGCCTGGCAG GGCCAGCGCA TTGCGCCGAA CATCTGCTAC
GAAGACCTGT TCGGCGACGA GATCGGCGCC AACTTCAAGG ACGAGGCCAC GGCGCCGACC
ATCCTGCTCA ACGTGAGCAA CATCGCGTGG TTCGGCAACT CGGTGGCCAT CGACCAGCAC
CTGGCCATCT CGCGCATGCG CTCGCTCGAA TTCGCGCGGC CGATGGTGCG CGCCACCAAC
ACCGGCGCCA CGGTGGTCAT CGATGCCGAA GGCCGCGTCA CGCACCAGCT GCCGCGGCTC
ACGCGCGGCG TGCTCGAGGC CTCGGTCGAA GGCCGGACGG GGCTCACGCC CTTTGCGCGC
TGGGTCGCGC ACTTCGGGCT GTGGCCGCTG TGGATTGCGG CGATCGCCAT CATGGCCATC
GCCTTCGTGC TGCGCCGGCG CCAGGGCTGA
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| Protein sequence | MPLPAAATLR TSPAFSAVGL LRLLAFAFAG LAQAAAIAWP ANGRPLWWLQ LVSLAVLVGL
LDWLRAEGAG WRRAGLHGWL FSTAWLTGSF WWLFISMHTY GGLPAPLAAI AVLSLAAALG
LYYAVACAWF VVRGPRGPVA GALVFAALWT LAELVRGSWF TGFPWGAGGY AHVEGPLAAW
APWIGVYGIG AVAALVAALV ALTRPARGIA LAQALALVAA AFAAPHLVAP LSGDAQGARG
SSGKLQLALL QGNIPQDEKF IPGGGIDLAL RWYGEQLRDA KASLVVTPET ALPLLPQQLP
EGYLEAIQAR YSQGTQAAIV GLPLGRQGTY SNAVLGFQPG AAQPYRYSKH HLVPFGEFIP
PGFRWFIRMM NIPLGDFARG GLAQAPFAWQ GQRIAPNICY EDLFGDEIGA NFKDEATAPT
ILLNVSNIAW FGNSVAIDQH LAISRMRSLE FARPMVRATN TGATVVIDAE GRVTHQLPRL
TRGVLEASVE GRTGLTPFAR WVAHFGLWPL WIAAIAIMAI AFVLRRRQG
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