Gene Vapar_4759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4759 
Symbol 
ID7971769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5056682 
End bp5057512 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content69% 
IMG OID644795344 
ProductABC transporter related 
Protein accessionYP_002946630 
Protein GI239817720 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.328175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA TCGAACCCCA CACCCTCGCG CCGCCCGCGG CGCCTGCCGT GCCCGCGGTG 
GAAGTGCTCT CGGCCGAGAA GACCTATCCC AACGGCACGC AGGCGCTGCT GCCGGTGGAC
CTGTCGATCG CCGAAGGCGA ATTCGTCACG CTGCTCGGGC CTTCGGGCTG CGGCAAGAGC
ACGCTGCTCA AGATGGTGGC GGGCATGCTC GAGCCGAGCG ACGGGCGGCT CTTGGTGTGG
CGCAAGCCGG TGGCGGAGAT CCACAGCTGC CCGCACAAGC TGTCCTTCGT GTTCCAGTCG
GCCACGCTGA TGCCGTGGGC CAGCGTGCGC ACCAACGTGC GGCTGCCGCT CGACCTGGCC
GGCGTGCCGC GCAAGGAGGC CGACGCGCGG GTGATGGAAT CGCTCGCGCT GGTGGGGCTC
GAGAAGTTTG CCGATGCACT GCCGCGCGCG CTCTCAGGCG GCATGCAGAT GCGCGTGTCG
ATCGCGCGCG GCCTCGTCAC GCAGCCCGAC CTGCTGCTGA TGGACGAGCC CTTCGGCGCG
CTCGACGAGA TCACGCGCCA CAAGCTCGAC GCCGACCTGC TCGACCTCTG GCGCAAGAAG
AAGCTCACGG TGATCTTCGT GACGCACTCG ATCCACGAGG CCGTGTTCCT GTCGACCCGC
GTGGTGATGA TGGCCGCGCG GCCGGGCCGC GTGGTGGAGC AGTTCCACAT CGACGAGCCC
TACCCGCGCA CCCCCGACTT CATGGTGACG CCGGAATTCG CGCGCCATGC CAGGCGCCTG
CAGGACAGCC TGCTGCGCGC CAGCCAGGCC GACGAGGAAC ATGCACGATG A
 
Protein sequence
MNRIEPHTLA PPAAPAVPAV EVLSAEKTYP NGTQALLPVD LSIAEGEFVT LLGPSGCGKS 
TLLKMVAGML EPSDGRLLVW RKPVAEIHSC PHKLSFVFQS ATLMPWASVR TNVRLPLDLA
GVPRKEADAR VMESLALVGL EKFADALPRA LSGGMQMRVS IARGLVTQPD LLLMDEPFGA
LDEITRHKLD ADLLDLWRKK KLTVIFVTHS IHEAVFLSTR VVMMAARPGR VVEQFHIDEP
YPRTPDFMVT PEFARHARRL QDSLLRASQA DEEHAR