Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4759 |
Symbol | |
ID | 7971769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5056682 |
End bp | 5057512 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795344 |
Product | ABC transporter related |
Protein accession | YP_002946630 |
Protein GI | 239817720 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGCA TCGAACCCCA CACCCTCGCG CCGCCCGCGG CGCCTGCCGT GCCCGCGGTG GAAGTGCTCT CGGCCGAGAA GACCTATCCC AACGGCACGC AGGCGCTGCT GCCGGTGGAC CTGTCGATCG CCGAAGGCGA ATTCGTCACG CTGCTCGGGC CTTCGGGCTG CGGCAAGAGC ACGCTGCTCA AGATGGTGGC GGGCATGCTC GAGCCGAGCG ACGGGCGGCT CTTGGTGTGG CGCAAGCCGG TGGCGGAGAT CCACAGCTGC CCGCACAAGC TGTCCTTCGT GTTCCAGTCG GCCACGCTGA TGCCGTGGGC CAGCGTGCGC ACCAACGTGC GGCTGCCGCT CGACCTGGCC GGCGTGCCGC GCAAGGAGGC CGACGCGCGG GTGATGGAAT CGCTCGCGCT GGTGGGGCTC GAGAAGTTTG CCGATGCACT GCCGCGCGCG CTCTCAGGCG GCATGCAGAT GCGCGTGTCG ATCGCGCGCG GCCTCGTCAC GCAGCCCGAC CTGCTGCTGA TGGACGAGCC CTTCGGCGCG CTCGACGAGA TCACGCGCCA CAAGCTCGAC GCCGACCTGC TCGACCTCTG GCGCAAGAAG AAGCTCACGG TGATCTTCGT GACGCACTCG ATCCACGAGG CCGTGTTCCT GTCGACCCGC GTGGTGATGA TGGCCGCGCG GCCGGGCCGC GTGGTGGAGC AGTTCCACAT CGACGAGCCC TACCCGCGCA CCCCCGACTT CATGGTGACG CCGGAATTCG CGCGCCATGC CAGGCGCCTG CAGGACAGCC TGCTGCGCGC CAGCCAGGCC GACGAGGAAC ATGCACGATG A
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Protein sequence | MNRIEPHTLA PPAAPAVPAV EVLSAEKTYP NGTQALLPVD LSIAEGEFVT LLGPSGCGKS TLLKMVAGML EPSDGRLLVW RKPVAEIHSC PHKLSFVFQS ATLMPWASVR TNVRLPLDLA GVPRKEADAR VMESLALVGL EKFADALPRA LSGGMQMRVS IARGLVTQPD LLLMDEPFGA LDEITRHKLD ADLLDLWRKK KLTVIFVTHS IHEAVFLSTR VVMMAARPGR VVEQFHIDEP YPRTPDFMVT PEFARHARRL QDSLLRASQA DEEHAR
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