| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4758 |
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| Symbol | |
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| ID | 7971768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5055684 |
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| End bp | 5056670 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795343 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_002946629 |
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| Protein GI | 239817719 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.622953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCCT TCGCTCTTTC CATGGCCGGC GCCGCCGCGC TCGCACTGTT CGCCGCTGCC
GCACCGGCCC AGGCGCAAGA CAAGTTCACC TACATGACCA ACTGGTATGC GCAGGCCGAG
CATGGCGGCT TCTACCAGGC GGTGGCGCTG GGCATCTACA AGAAGCACGG CCTGGACGTG
ACCATCAAGA TGGGCGGTCC GCAGGTCAAC ATCACGCAGA TGATGGCCGC GGGCCAGGCC
GACTGCATCA TGGGTTCGAG CGACATCCAG ATGATGCAGG TGCGCGAAGG CGGCGTGCCG
GTGGTCAACG TGGCGGCCTT CTTCCAGAAG GACCCGCAGG TGCTGATCGC GCACGACGAC
GTCAAGAAGT TCGAGGACCT CAAGGGCAAG ACGCTGCTGA TCGGCGCGCA GGCCAACCGC
GGCTACTGGC CCTGGCTCAA GGCCAGGTTC GGCCTCAAGG ACGAACAGAC GCGCCCCTAC
ACCTTCAACA TCCAGCCCTT CGTGGCCGAC CCGAACGCCG CGCAGCAAGG CTACCTGACC
TCGGAGCCCT ACGCGATCCA GAAGGCCGGC GTGAAGAGCA CCGTGCTGAT GTTCAGCGAC
CACGGCTTCC CGGCCTACGC CACCACGGTG TCGTGCATGG AAAAGACCGT GAAGGACCGC
AGCAAGCAGG TGGAAGCCTT CGTGAAGGCC TCGGCCGAGG GCTGGAAGAG CTACCTCGCC
GATCCGGCGC CCGCCAACGC GCTGATCAAG AAGGACAACC CCAACATGAC CGACGACCAG
CTGGCCTACA GCGTGGCCAA GCTCAAGGAG ATGGGCATGG TCACTGGCGG CGATGCGGCC
AAGCTCGGCA TCGGCGTGAT CACCGATGCG CGTTCCAAGG CGAGCTACGA CTTCCTCGTG
GGCGCCAAGC TGCTCGACCC GGCAAAGGTG GAACTCGCCA AGACCTACAC CACCGAGTTC
GTCAAGGACG CGAAGGTCTT GCCCTGA
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| Protein sequence | MRSFALSMAG AAALALFAAA APAQAQDKFT YMTNWYAQAE HGGFYQAVAL GIYKKHGLDV
TIKMGGPQVN ITQMMAAGQA DCIMGSSDIQ MMQVREGGVP VVNVAAFFQK DPQVLIAHDD
VKKFEDLKGK TLLIGAQANR GYWPWLKARF GLKDEQTRPY TFNIQPFVAD PNAAQQGYLT
SEPYAIQKAG VKSTVLMFSD HGFPAYATTV SCMEKTVKDR SKQVEAFVKA SAEGWKSYLA
DPAPANALIK KDNPNMTDDQ LAYSVAKLKE MGMVTGGDAA KLGIGVITDA RSKASYDFLV
GAKLLDPAKV ELAKTYTTEF VKDAKVLP
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