| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4748 |
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| Symbol | |
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| ID | 7971758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5046492 |
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| End bp | 5047562 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795333 |
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| Product | L-asparaginase, type II |
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| Protein accession | YP_002946619 |
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| Protein GI | 239817709 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCTTT CCCCCCGTTT CCGCGCCTTC GCGGCCGGTG CCGCACTGCT CGCGGCCAGC
GCCCTGGCGC AAGCCCAGCA GGCGTTGCCC AATGTGGTGA TCCTGGCCAC CGGCGGCACC
ATCGCGGGCG CCGGCGCCTC GGCCGTCAAC AGCGCCACCT ACGCGGCCGC CAAGGTCGGC
GTCGAGAAGC TGATCGCCGG CCTGCCCGAG CTCTCCAAGA TCGCCAACGT GCGCGGCGAG
CAGGTGTTCC AGGTCGCTTC CGAAAGCCTC ACCAACGACA ACCTGCTGAC GCTCGCCAAG
CGCGTCTCGG CGCTGTCGAA GCAGGCGGAC GTGGACGGCA TCGTCATCAC CCACGGCACC
GACACGCTCG AGGAAACCGC CTACTTCCTC ACGCTCACCG TGCACACCAG CAAGCCGATC
GTGGTGGTCG GCTCGATGCG CCCGGGCACG GCCCTTTCCG CCGACGGTGC GCTCAACCTG
TACGACGCCG TCAGCGTGGC CGGCAGCAAG GACGCGGCGG GCAAGGGCGT GCTCGTGACG
ATGAACGACA ACATCGACAG CGGCCGCGAC GTGAGCAAGA ACGTCAACAT CAAGACCAGC
GCCTTCTCGA GCCAGTGGGG CCCGCTCGGC ATGGTGGTCG AGGGCAAGAA CTACTGGTTC
CGCGCGCCGG TCAAGCGCCA CACCATGAGT TCGGAGTTCG ACATCGACGC CATCACCGCG
CTGCCGCCGG TCGAGATTGC GATGGGCTAC GAGGGCGTCT CGTCCATCGC CATCGACGCG
CTGGCCAAGA GCGGCGTGAA GGCGATCATC CATGGCGGCA CGGGCAACGG CTCGGTGGCC
AACCGCATCG TGCCCAACCT GCAGAAGGCG CGCACCGACG GCGCAATCAT CATCCGCAGC
TCGCGCGTGC CCGACGGCTT CGTGATCCGC AATGCCGAGC AGCCCGACGA CAAGTACGAC
TGGGTGGTGG CGCACGACCT GCGTCCGCAG AAGGCGCGCA TCCTGGCGAT GGTGGCGCTG
ACCAAGACCA GCGACACCAA AGAGCTCCAG CGCATCTTCT GGGAGTATTG A
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| Protein sequence | MYLSPRFRAF AAGAALLAAS ALAQAQQALP NVVILATGGT IAGAGASAVN SATYAAAKVG
VEKLIAGLPE LSKIANVRGE QVFQVASESL TNDNLLTLAK RVSALSKQAD VDGIVITHGT
DTLEETAYFL TLTVHTSKPI VVVGSMRPGT ALSADGALNL YDAVSVAGSK DAAGKGVLVT
MNDNIDSGRD VSKNVNIKTS AFSSQWGPLG MVVEGKNYWF RAPVKRHTMS SEFDIDAITA
LPPVEIAMGY EGVSSIAIDA LAKSGVKAII HGGTGNGSVA NRIVPNLQKA RTDGAIIIRS
SRVPDGFVIR NAEQPDDKYD WVVAHDLRPQ KARILAMVAL TKTSDTKELQ RIFWEY
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