| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4744 |
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| Symbol | glyQ |
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| ID | 7971754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5042604 |
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| End bp | 5043509 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795329 |
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| Product | glycyl-tRNA synthetase subunit alpha |
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| Protein accession | YP_002946615 |
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| Protein GI | 239817705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGACCT TCCAGCAAAT CATTCTCAAA CTGCAGTCGT ACTGGGCCGA CAAGGGCTGT
GCGCTGCTGC AACCCTACGA CATGGAAGTG GGCGCGGGCA CCTCGCACAC CGCCACCTTC
CTGCGCGCAC TCGGCCCCGA GCCCTGGAAG GCCGCCTACG TGCAGCCCAG CCGCCGCCCC
AAGGACGGCC GCTACGGCGA GAACCCCAAC CGCCTGCAGC ACTACTACCA GTACCAGGTG
GTGCTCAAGC CGGCGCCCAG CAACATCCTG GAGCTGTACC TCGGCAGCCT CGAGGCGCTG
GGCTTCGACT TGAAGAAAAA CGACATCCGC TTCGTCGAAG ACGACTGGGA GAATCCCACG
CTCGGCGCCT GGGGCCTGGG CTGGGAAGTC TGGCTCAACG GCATGGAAGT GACGCAGTTC
ACCTATTTCC AGCAGGTCGG CGGCATCGAC TGCAAGCCCA TCACCGGCGA GATCACCTAC
GGCCTGGAGC GGCTGGCCAT GTACCTGCAG GGCGTGGACA ACGTCTACAA CCTCACCTGG
ACCGACGGCC TGAGCTACGG CGACGTCTAC AAGCAGAACG AGGTCGAGCA GTCGACCTAC
AACTTCGAGC ACAGCGACGC CGAGTTTTTG TTCACTGCCT TCGCGGCGCA CGAGAAGCAG
GCCAGGCACC TCATGACAGA GCAGCTCGCG CTGCCGGCCT ACGAGCAGGT GCTCAAGGCC
GCGCACAGCT TCAACCTGCT CGACGCGCGC GGCGCCATCA GCGTGACCGA GCGCGCGGCC
TACATCGGCC GCATCCGCAA CCTCGCGCGC AGCGTGGCGC AGAGCTACTA CGAGAGCCGC
CAGCGGCTCG GTTTTCCGAT GGCGCCTCGC GAGTGGGTTG CACAAATCAC GAAGAAGGCG
GCCTGA
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| Protein sequence | MLTFQQIILK LQSYWADKGC ALLQPYDMEV GAGTSHTATF LRALGPEPWK AAYVQPSRRP
KDGRYGENPN RLQHYYQYQV VLKPAPSNIL ELYLGSLEAL GFDLKKNDIR FVEDDWENPT
LGAWGLGWEV WLNGMEVTQF TYFQQVGGID CKPITGEITY GLERLAMYLQ GVDNVYNLTW
TDGLSYGDVY KQNEVEQSTY NFEHSDAEFL FTAFAAHEKQ ARHLMTEQLA LPAYEQVLKA
AHSFNLLDAR GAISVTERAA YIGRIRNLAR SVAQSYYESR QRLGFPMAPR EWVAQITKKA
A
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