| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4737 |
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| Symbol | |
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| ID | 7971747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5034416 |
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| End bp | 5035726 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795322 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_002946608 |
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| Protein GI | 239817698 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACGC TGGCTGAGCT GCGCGCGGGC CGGCTGGCAG GCGCAAGACG AATCGATCTC
TCGTGCGGAC TCACCGAGTT TCCGCGCGAG ATCTTCGACC TGGCCGATTC GCTCGAGACA
CTGAACCTCT CCGCCAATGC GCTCGACGCA TTGCCCGACG ACCTCGGCCG GCTGCACCGC
CTGCGCGTGC TGTTCTGCTC CGACAACCGC TTCACGCGGC TGCCCGAATC CATCGGCCAG
TGCCAGGCGC TGGAGATGGT CGGATTCAAG GCCAACCGCA TCCGCACCGT GCCTGCCGCC
GCGCTGCGGC TGCCGGCGCT GCGCTGGCTG ATCCTCACGG ACAACCAGAT CGAGACCCTG
CCCGAGGCGC TGGGCCAATG CACCGCCATG CAGAAGCTCA TGCTGGCCGG CAACCGGCTG
CGTGCGCTGC CGGAATCGCT GGCGGCCTGC GGCCGGCTCG AGCTGCTGCG CATTTCGGCC
AACAGCTTCG AGGCGCTGCC CGCATGGCTG CTGGCGCTGC CGCGCCTGTC GTGGCTCGCG
GGTGCAGGCA ACCCCTTTGA CATGCAGGCC GAGCAGGCAG CCATCGCCGC GCAGTCGGTG
CCGCATGTCG ACTGGCGCGA CCTGGCGCTG GGACAGAAGC TCGGCGAAGG CGCATCGGGC
GTCATCTACC AGGCGGTGCT GGGCCCCGCG TCGCGGCCGG TGGCGGTCAA GCTGTTCAAG
GGCGCGGTCA CCAGCGACGG CTGGCCGCAC AGCGAGATGG CCGCCAGCAT CGCGGCCGGC
GCGCATCCGA CACTGATCGC CGCACAAGGC CGGATCGATG GACATCCGGA TGGCACCCAG
GGCCTCGTCA TGGCGCTGGT GGATCCGTCT TTCCGCACGC TCGCCGGCCC GCCGAGCCTC
GCGTCCTGCA CGCGCGACGT CTATGCGGCC GATGCGCAGT GGACTTCCGC CGTGGCCTTG
CGCATTGCCC GCGACATCGC GTCCGCCATG CGGCACCTGC ATGCGCGCGG CATCCTGCAC
GGCGACCTCT ACGCACACAA CATCCTCTGG AACGCGCAAG GCGGTGGACT GCTCGGCGAT
TTCGGTGCGG CCTGGATGAC GGGCGCACTC GACACGGCGC AAGCCCAGGC ACTGCAGCGG
CTGGAGATGC GCGCCTTCGG CTGCCTGCTG GAAGAACTGC TCGAGCGCTG CAGCGATGCA
CTGCCGCAGG CCGTGGTCGT GCTGAAGGAT CGCTGCCTGC AGGCCGATGC GTCCGCGCGG
CCCTCGTTCG CCGAGGCCTT GGCGCTGCTC CAGGGCGAGC TCTCGCCATG A
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| Protein sequence | MDTLAELRAG RLAGARRIDL SCGLTEFPRE IFDLADSLET LNLSANALDA LPDDLGRLHR
LRVLFCSDNR FTRLPESIGQ CQALEMVGFK ANRIRTVPAA ALRLPALRWL ILTDNQIETL
PEALGQCTAM QKLMLAGNRL RALPESLAAC GRLELLRISA NSFEALPAWL LALPRLSWLA
GAGNPFDMQA EQAAIAAQSV PHVDWRDLAL GQKLGEGASG VIYQAVLGPA SRPVAVKLFK
GAVTSDGWPH SEMAASIAAG AHPTLIAAQG RIDGHPDGTQ GLVMALVDPS FRTLAGPPSL
ASCTRDVYAA DAQWTSAVAL RIARDIASAM RHLHARGILH GDLYAHNILW NAQGGGLLGD
FGAAWMTGAL DTAQAQALQR LEMRAFGCLL EELLERCSDA LPQAVVVLKD RCLQADASAR
PSFAEALALL QGELSP
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