Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4736 |
Symbol | |
ID | 7971746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5033327 |
End bp | 5034406 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795321 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_002946607 |
Protein GI | 239817697 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTCC TCGAACGCGA ACTCCACTAC CCCCTGGGCG ACACCCTGCC CGCCCCCGGC GAAGCACTGG AAGTCGCGCC GGGCGTGCGA TGGATCCGCA TGCGGCTGCC GTTCGCGCTC GATCACATCA ACCTCTGGCT GCTGCGCGAC AACCTCGATG GCGTCGAGGG CTGGACCGTG GTCGATTGCT GCATCGCGCA CGACGAAGCC CGCGCCCAGT GGGAGCAGGT GTTCGAGACG CAGCTGCAGG GCCTGCCGAT CCTGCGCGTG ATCGTCACCC ACATGCACCC CGACCACATC GGCCTGGCCG AGTGGCTGTG CACGCGCTGG AACGCGCCGC TGTGGATCAG CTCGACCGAC TACCACGTGG CGCGCGTGCT GAGCACCGCT GGCGACACGC TGGCGGGCGG CGACGCGGCG GCGAGCTTCT TTGCCTCGCA CGGCCTCGTC GACCCCGAGG CGGTGGCCAA GATCCGCGCG CGCACCAACT ACTACGCCAA CATGGTGCCC TCCGTGCCCG ACCGCTTCAC GCGCATGATG GACGGCGACA CCGTGGCCAT CAACGGCCAC GCCTGGCGCT GCATCAGCGG CTACGGCCAT GCGCCCGAGC ACATCGCGCT GTACTGCGAC GATCTCAAGC TGCTGCTGGG CGGCGACATG ATGCTGCCGC GCATCTCGAC CAACGTGAGC GTGCATGCAG GCGAGCCCGA AGCCAATTCG CTGCGGCTCT TCCTGGACAG CATCGACAAG TTCAAGGCGC TGCCGGCCGA CACGCTGGGC CTGCCCTCGC ACGGCAAGCC GTTCACGGGC ATTCACCGCC GCGTCGACCA GCTGCAGGAG CACCACCGCG ACCGCCTGGC CGAACTGCTC GAAGCCTGCA CCGCGCGCCC GCTGACCGCG GCCGAGGGCC TGCCGATCCT GTTCAAGCGC GAACTCGATC TGCACCAGAT GACCTTCGCC ATGGGCGAGA CCGTGGCGCA CCTGCACCTG CTGTGGTTCG CGGGCCAGGT CCGGCGCGAG CTCGGCGAGG ACGGCATCTA CCGATTCGAA CCCCGCAGCG CCACGGCCCG GGCACTTTAG
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Protein sequence | MNLLERELHY PLGDTLPAPG EALEVAPGVR WIRMRLPFAL DHINLWLLRD NLDGVEGWTV VDCCIAHDEA RAQWEQVFET QLQGLPILRV IVTHMHPDHI GLAEWLCTRW NAPLWISSTD YHVARVLSTA GDTLAGGDAA ASFFASHGLV DPEAVAKIRA RTNYYANMVP SVPDRFTRMM DGDTVAINGH AWRCISGYGH APEHIALYCD DLKLLLGGDM MLPRISTNVS VHAGEPEANS LRLFLDSIDK FKALPADTLG LPSHGKPFTG IHRRVDQLQE HHRDRLAELL EACTARPLTA AEGLPILFKR ELDLHQMTFA MGETVAHLHL LWFAGQVRRE LGEDGIYRFE PRSATARAL
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