Gene Vapar_4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4734 
Symbol 
ID7971744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5031999 
End bp5032766 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID644795319 
ProductCarbonate dehydratase 
Protein accessionYP_002946605 
Protein GI239817695 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACA ATCTTGATGA CCTGTTTGCC CACAACCGTG CCTGGTCCGC ACAGATGGAA 
CGCGACCGGC CCGGCTTCTT CACCAGCCTG GTGAAGCAGC AGACGCCGCG CTACATGTGG
ATCGGCTGCT CAGACAGCCG CGTGCCCGCC AACCAGATCA CCGGCCTGGA GCCGGGCGAG
GTGTTCGTGC ACCGCAACGT CGCCAATATC GTGGTGCACT CCGACCTCAA CGCGCTCTCG
GCGATCCAGT TCGCGGTCGA GCACCTGAAG GTCGAGCACA TCATGGTGGT GGGCCACTAC
GGCTGCGCCG GCGTGAAGGC GGCGCTCAGC GGCAAGCGCA TCGGCCTGGC CGACAACTGG
ATCCGCCACA TCCAAGACGT GCGCGACCGC CACGCCGTGA TGCTCGATTC CCTGCCCGAG
GACGTGCGCG TCGATGCGCT GTGCGAGCTC AACGTGGCCG AGCAGGTGGT CAATGTGGCC
GTCAGCACCG TGATGGTCGA CGCCTGGGGC CGCGGCCAGA AGGTCAAGAT CCACGGCTGG
ACCTTCGGCG TGCACGACGG CCTGCTGCAG GACCTGGGCC TGAACGTGGA TGGCGCCAGG
CCGCTCGACG CGGTCTACAA GGCCGCGGTG CAGCGCATCC GCTACAAGTG GAGCAAGCCC
CTGGGTGCCT CGCCGTCGGC GCAGGCCGGG GCCGACGGGA CCGAAGGCAT CGATGCCGCC
GCGGCCGTTG CCCAGGCCAT CGAGAGCACC GGAACGAAAA CCGGCTGA
 
Protein sequence
MSDNLDDLFA HNRAWSAQME RDRPGFFTSL VKQQTPRYMW IGCSDSRVPA NQITGLEPGE 
VFVHRNVANI VVHSDLNALS AIQFAVEHLK VEHIMVVGHY GCAGVKAALS GKRIGLADNW
IRHIQDVRDR HAVMLDSLPE DVRVDALCEL NVAEQVVNVA VSTVMVDAWG RGQKVKIHGW
TFGVHDGLLQ DLGLNVDGAR PLDAVYKAAV QRIRYKWSKP LGASPSAQAG ADGTEGIDAA
AAVAQAIEST GTKTG