Gene Vapar_4732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4732 
Symbol 
ID7971742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5028927 
End bp5030111 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content68% 
IMG OID644795317 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002946603 
Protein GI239817693 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT CCATCGTCAT CGTCGGCGCC GCCCGCACCC CCATGGGGAG CTTCCAGGGC 
GACTTCTCTT CCCTTGCCGC GCACGACCTC GGCGGCGCCG CCATCAAGGC CGCCGTCGAG
CGCGCCGGCA TCGCGCCCGA CAGCGTGGGC GAAGTGCTGT TCGGCAATTG CCTGATGGCC
GGCCAGGGCC AGGCGCCGGC GCGCCAGGCG GCCTACAAGG GCGGCCTGCC CGACAGCGCG
GGCGCGGTCA CGCTCAGCAA GATGTGCGGC TCGGCCATGA AGGCCGCGAT GCTCACGCAC
GACCTGCTGC TGGCCGGCAC GCACGAGGTG ATGGTGGCTG GCGGCATGGA GAGCATGACC
AACGCGCCCT ACCTCATGCT CAAGGGCCGC GGCGGCTACC GCATGGGCCA CGACCGCATC
TTCGACCACA TGATGCTCGA CGGCCTGGAA GACGCCTACC AGCCGGGCCG CTCGATGGGC
ACCTTCGGCG AGGACTGCGC CGCCAAGTAC AAGTTCACGC GCGAGCAGCA AGATGCGTTT
GCCATTGCCA GCGTGCAGCG CGCCAAGGCC GCCACCGAAT CCGGCGCGTT CAAGGACGAG
ATCACGCCCA TCACCGTGAA GGGCCGCGGC GGCGACACCG TCATTTCCAT CGACGAAGGC
CCGGGCAAGG TCAAGCTCGA CAAGATCGCC ACGCTCAAGC CCGCGTTCAA GAAGGAAAAC
GGCACCATCA CCGCCGCATC GAGCTCGTCG ATCAACGACG GCGCCGCCGC GCTGGTGATG
ATGACCGAGT CGCACGCCAA GAAGATCGGC GCCAGGCCGA TCGCCCGCAT CGTCGGCCAT
GCCACGCATG CGCAGCAGCC CGAGTGGTTC TCCACCGCGC CGGTCGGCGC CGTGGCCAAG
CTGTTCAAGA AGACCGGCTG GACCGTCAAG GACGTGGACC TGTGGGAAGT GAACGAGGCT
TTCGCGGTGG TGCCGATGGC GCTGATGCAC GAGCTCGACG TGTCGCACGA GATCGTCAAC
GTGAACGGCG GCGCCTGCGC GCTGGGCCAC CCGATCGGCG CCAGCGGCGC GCGCATCATG
GTCACGCTGA TCCATGCGCT GAAGGCGCGC GGCAAGAAGC GCGGCGTGGC CACGCTGTGC
ATCGGCGGGG GCGAAGGCAC CGCCGTGGCA CTCGAGTTGC TTTAA
 
Protein sequence
MPESIVIVGA ARTPMGSFQG DFSSLAAHDL GGAAIKAAVE RAGIAPDSVG EVLFGNCLMA 
GQGQAPARQA AYKGGLPDSA GAVTLSKMCG SAMKAAMLTH DLLLAGTHEV MVAGGMESMT
NAPYLMLKGR GGYRMGHDRI FDHMMLDGLE DAYQPGRSMG TFGEDCAAKY KFTREQQDAF
AIASVQRAKA ATESGAFKDE ITPITVKGRG GDTVISIDEG PGKVKLDKIA TLKPAFKKEN
GTITAASSSS INDGAAALVM MTESHAKKIG ARPIARIVGH ATHAQQPEWF STAPVGAVAK
LFKKTGWTVK DVDLWEVNEA FAVVPMALMH ELDVSHEIVN VNGGACALGH PIGASGARIM
VTLIHALKAR GKKRGVATLC IGGGEGTAVA LELL