Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4732 |
Symbol | |
ID | 7971742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5028927 |
End bp | 5030111 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644795317 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_002946603 |
Protein GI | 239817693 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGAAT CCATCGTCAT CGTCGGCGCC GCCCGCACCC CCATGGGGAG CTTCCAGGGC GACTTCTCTT CCCTTGCCGC GCACGACCTC GGCGGCGCCG CCATCAAGGC CGCCGTCGAG CGCGCCGGCA TCGCGCCCGA CAGCGTGGGC GAAGTGCTGT TCGGCAATTG CCTGATGGCC GGCCAGGGCC AGGCGCCGGC GCGCCAGGCG GCCTACAAGG GCGGCCTGCC CGACAGCGCG GGCGCGGTCA CGCTCAGCAA GATGTGCGGC TCGGCCATGA AGGCCGCGAT GCTCACGCAC GACCTGCTGC TGGCCGGCAC GCACGAGGTG ATGGTGGCTG GCGGCATGGA GAGCATGACC AACGCGCCCT ACCTCATGCT CAAGGGCCGC GGCGGCTACC GCATGGGCCA CGACCGCATC TTCGACCACA TGATGCTCGA CGGCCTGGAA GACGCCTACC AGCCGGGCCG CTCGATGGGC ACCTTCGGCG AGGACTGCGC CGCCAAGTAC AAGTTCACGC GCGAGCAGCA AGATGCGTTT GCCATTGCCA GCGTGCAGCG CGCCAAGGCC GCCACCGAAT CCGGCGCGTT CAAGGACGAG ATCACGCCCA TCACCGTGAA GGGCCGCGGC GGCGACACCG TCATTTCCAT CGACGAAGGC CCGGGCAAGG TCAAGCTCGA CAAGATCGCC ACGCTCAAGC CCGCGTTCAA GAAGGAAAAC GGCACCATCA CCGCCGCATC GAGCTCGTCG ATCAACGACG GCGCCGCCGC GCTGGTGATG ATGACCGAGT CGCACGCCAA GAAGATCGGC GCCAGGCCGA TCGCCCGCAT CGTCGGCCAT GCCACGCATG CGCAGCAGCC CGAGTGGTTC TCCACCGCGC CGGTCGGCGC CGTGGCCAAG CTGTTCAAGA AGACCGGCTG GACCGTCAAG GACGTGGACC TGTGGGAAGT GAACGAGGCT TTCGCGGTGG TGCCGATGGC GCTGATGCAC GAGCTCGACG TGTCGCACGA GATCGTCAAC GTGAACGGCG GCGCCTGCGC GCTGGGCCAC CCGATCGGCG CCAGCGGCGC GCGCATCATG GTCACGCTGA TCCATGCGCT GAAGGCGCGC GGCAAGAAGC GCGGCGTGGC CACGCTGTGC ATCGGCGGGG GCGAAGGCAC CGCCGTGGCA CTCGAGTTGC TTTAA
|
Protein sequence | MPESIVIVGA ARTPMGSFQG DFSSLAAHDL GGAAIKAAVE RAGIAPDSVG EVLFGNCLMA GQGQAPARQA AYKGGLPDSA GAVTLSKMCG SAMKAAMLTH DLLLAGTHEV MVAGGMESMT NAPYLMLKGR GGYRMGHDRI FDHMMLDGLE DAYQPGRSMG TFGEDCAAKY KFTREQQDAF AIASVQRAKA ATESGAFKDE ITPITVKGRG GDTVISIDEG PGKVKLDKIA TLKPAFKKEN GTITAASSSS INDGAAALVM MTESHAKKIG ARPIARIVGH ATHAQQPEWF STAPVGAVAK LFKKTGWTVK DVDLWEVNEA FAVVPMALMH ELDVSHEIVN VNGGACALGH PIGASGARIM VTLIHALKAR GKKRGVATLC IGGGEGTAVA LELL
|
| |