| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4725 |
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| Symbol | |
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| ID | 7971735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5021287 |
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| End bp | 5022315 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795310 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002946596 |
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| Protein GI | 239817686 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCCC CGTCCTTCCT CCGACCCGCC CGCGCCGTCA CGCCGATGGC TTTCGTGAGA
GCCATCGTGC AGGGCTACGA GCGCTACGGC GTCGATCCGT CCGCGGCGCT GCAAGCGGCA
CAGATCACGC CGCGCGAACT GGCCCGGCCG GGCGCGCGGG TGACGGCCGC GCAGTTCGAG
GCGCTGTCGG GCCATGCGAT GCAGGAGCTG GACGACGAGG CGCTCGGCTG GTTCTCGCGG
CGCCTGCCAT GGGGCAGCCA CGGCATGCTG TGCCGCGCCT CGCTGACCTC GCCCGACCTG
GGCGTGGCGA TCAAGCGCTG GTGCCGCCAT CACCGCCTGC TGACCGAGGA CATCACGCTG
GCGCTGGAGG TGTCGGGCGG CGTGGCCACG CTGCGCATCG CCGAGCACCG CCCGCTGGAC
GAGGCCTTCC GCGAGTTCTG CCTGGTGACG AGCCTGCGCT TCTTGCACGG GTACGTCTGC
TGGGCCATCG ATTCGCGCAT CTCGCTGCGG GACGCGACTT TTCCCTTTGC AGCGCCGCCG
CACCGCGACG CCTATCCGCT GATGTTCACG CCCGAGGTGC GCTTCGATGC GCCCGAGGCG
AGCATCAGCT TCGACGAGCG CTACCTCGCG CTGCCGCTGC AGCGCGACGA GCGCGCGCTG
CGCACGATGC TCAAGCGGGC GCTGCCGCTC ACGGTGCTGC AGTACCGGCG CGACCGGCTG
CTGGGCCAGC GCGTGCGCGA GCTGCTGCGT TCGCGCGCCG CCGAGGCCAC GACGGCGGAG
GCGCTGGCCA CGCTGCTCAA CGTGTCGAGC CGCACGCTGC ACCGGCAGTT GCATGAAGAA
GGCACGTCAC TGCAGACGCT GAAGAACGAA GTGCGCCACG AGATGGCGGT GGAACAGTTG
CGCCGCACCA GCCGGCCGAT CAAGCAGGTG GCGCTGGCCG TGGGCTTTCG CAACGAGAAG
AGCTTTTCGC GTGCGTTCCT GCAATGGACG GGACATGCGC CGCGGGACTT TCGGCTGCGG
GGGTTGTAG
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| Protein sequence | MSSPSFLRPA RAVTPMAFVR AIVQGYERYG VDPSAALQAA QITPRELARP GARVTAAQFE
ALSGHAMQEL DDEALGWFSR RLPWGSHGML CRASLTSPDL GVAIKRWCRH HRLLTEDITL
ALEVSGGVAT LRIAEHRPLD EAFREFCLVT SLRFLHGYVC WAIDSRISLR DATFPFAAPP
HRDAYPLMFT PEVRFDAPEA SISFDERYLA LPLQRDERAL RTMLKRALPL TVLQYRRDRL
LGQRVRELLR SRAAEATTAE ALATLLNVSS RTLHRQLHEE GTSLQTLKNE VRHEMAVEQL
RRTSRPIKQV ALAVGFRNEK SFSRAFLQWT GHAPRDFRLR GL
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