| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4724 |
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| Symbol | |
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| ID | 7971734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5019971 |
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| End bp | 5021143 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795309 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002946595 |
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| Protein GI | 239817685 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.514268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGATC CCGGCCTGAA CTTCGATCTG GGCGACACCA TCGACTCGCT GCGCAGCGCC
ATCCAGGACT TTGCCGCGAA CGAGATCGCC CCGCGCGCCG CCGACATCGA CCGCGACAAC
CTGTTCCCGC ACGACCTGTG GCAGAAGCTC GGCGAGCTCG GCCTGCACGG CATGACGGTG
AAGGAAGAGT TCGGCGGCAC CGAGCTGGGC TACCTCGCGC ACATCGTGGC GATGGAAGAG
GTGTCGCGCG CCTCGGCCTC GGTCGGCCTT TCGTACGGCG CGCACTCCAA CCTGTGCGTG
AACCAGATCC ACCGCAACGG CAGCGATGCG CAGAAGAAGA AATACCTGCC CAGGCTGGTG
AGCGGCGAGC ACGTGGGCGC GCTGGCCATG AGCGAGCCCA ACGCCGGCTC CGACGTGGTG
AGCATGAAGC TCAAGGCCGA GAAGAAGAAC GGCTACTACG TGCTCAACGG CGGCAAGATG
TGGATCACCA ACGGCGGCGA CGCCGACACG CTCGTGATCT ACGCCAAGAC CGAACCCGAG
ATGGGCGCGC GCGGCATGAC GGCCTTCATC GTCGAGAAGG GCTTCAAGGG CTTCTCGGCC
GGCACCAAGC TCGACAAGCT CGGCATGCGC GGCTCCAACA CCTATCCGCT GTTCTTCGAC
AACTGCGAAG TGCCCGAAGA GAACGTGCTC GGCGGCGAAG GCATGGGCGC CAAGGTGCTG
ATGAGCGGTC TCGACTACGA GCGCGCGGTG CTGTCGGGCG GGCCGCTGGG CATCATGGCG
GCCTGCATGG ACGCGGTGCT GCCCTTCATC CACGAGCGCA AGCAGTTCGG CCAGAGCATC
GGCGAGTTCC AGCTGATGCA GGGCAAGCTC GCCGACATGT ACTCGACCTG GCAGGCCACG
CGCGCTTATG TGTACGCGGT GGGCAAGGCC TGCGACCGCA ACGACCACGC GCGCACCTTC
CGCAAGGACG CGGCCGGCGC CATTCTCTAT TCGGCCGAGA AGGCCACGTG GATGGCCGGC
GAGGCGATCC AGGCTCTGGG CGGCGTGGGC TACACGAAGG ACTTTCCGGT CGAGCGGCTG
TGGCGCGACG CCAAGCTGTA CGAGATCGGT GCGGGCACGA GCGAGATCCG CCGCATGCTG
ATCGGGCGCG AGCTGTTTGC TGAAACCGCC TAG
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| Protein sequence | MHDPGLNFDL GDTIDSLRSA IQDFAANEIA PRAADIDRDN LFPHDLWQKL GELGLHGMTV
KEEFGGTELG YLAHIVAMEE VSRASASVGL SYGAHSNLCV NQIHRNGSDA QKKKYLPRLV
SGEHVGALAM SEPNAGSDVV SMKLKAEKKN GYYVLNGGKM WITNGGDADT LVIYAKTEPE
MGARGMTAFI VEKGFKGFSA GTKLDKLGMR GSNTYPLFFD NCEVPEENVL GGEGMGAKVL
MSGLDYERAV LSGGPLGIMA ACMDAVLPFI HERKQFGQSI GEFQLMQGKL ADMYSTWQAT
RAYVYAVGKA CDRNDHARTF RKDAAGAILY SAEKATWMAG EAIQALGGVG YTKDFPVERL
WRDAKLYEIG AGTSEIRRML IGRELFAETA
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