Gene Vapar_4720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4720 
Symbol 
ID7971730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5014703 
End bp5015374 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID644795305 
Productputative transmembrane protein 
Protein accessionYP_002946591 
Protein GI239817681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGC TCGACATGCC CCAGCTGCTC GCACTGGCCG CGGCCATCGG CTGGGCCAGC 
GGCGTGCGGC TGTACCTGGT CGTGCTGCTG ACCGGGCTGG CCGGCTACTT CGGCTGGGTG 
CCGCTGCCCA GCGGGCTGCA GCTGCTGGCG CATCCGGTGG TCATCGCGGC CAGCGGCTTC 
ATGGTCTTCA TCGAGTTCTT CGCCGACAAG ATCCCGGGCC TCGATTCGCT GTGGGACGTG 
GTGCACACGG CCATCCGCAT TCCCGCCGGC GCGGCGCTCG CGGCCAGCGT GTTCGGCGCC 
GACCATGGCG CGATGGCCAT CGTGGCCGCG CTCGTGGGCG GCGGCTTCGC GGCCACCGCG 
CATGCGGCCA AGGCCACGAC ACGCGCGGCC ATCAACACAT CGCCCGAGCC ATTCTCGAAC 
GTGGGCGCCT CGCTGGTCGA GGACACGATG GTGCCAACCG GGCTGTGGCT CGCGGTGGCG 
CATCCGCTGG TCTTCCTGGT GCTGTTCGTG CTGGTGCTGG TGCTCAGCGT CTGGCTCATC 
CGCAAGAGCT GGCGCTTTCT CAAGGCGCTG TTCACTCGCG TGGCCCGCAT CTTCAGCGGG 
CGGCCCGATC CGGGCGTCAC GCCTGCATTC CAACTGAAAA AGAATCCTCC GGGAGACACT 
CCGAATGTTT AA
 
Protein sequence
MNALDMPQLL ALAAAIGWAS GVRLYLVVLL TGLAGYFGWV PLPSGLQLLA HPVVIAASGF 
MVFIEFFADK IPGLDSLWDV VHTAIRIPAG AALAASVFGA DHGAMAIVAA LVGGGFAATA 
HAAKATTRAA INTSPEPFSN VGASLVEDTM VPTGLWLAVA HPLVFLVLFV LVLVLSVWLI 
RKSWRFLKAL FTRVARIFSG RPDPGVTPAF QLKKNPPGDT PNV