| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4713 |
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| Symbol | |
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| ID | 7971723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5007741 |
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| End bp | 5008967 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795298 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002946584 |
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| Protein GI | 239817674 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCA CCGGACCACT TCAAGGCATC CGCATCCTCG ACCTCACGGC CGTGGTGATG
GGCCCCTACG CCACGCAGAC GCTCGGCGAC CTTGGCGCCG ACATCGTCAA GGTCGAGCCG
CCTTCCGGCG ACAACCTGCG CGCCGTGGGC CCGATGCGCC ACGCCGGCAT GGGCGCGATG
GCGCTGCACC TGAACCGCAA CAAGCGCTCG ATCGTGCTCG ACCTCAAGCA GCCCGAAGGC
CGCGAGGCGT GCCTGCGGCT CGCGGCGGGC TGCGATGCGC TGATCTACAA CACGCGCCCG
CAGGCGATGG CGCGGCTCGG GCTCGGCTAC GAGGCCGTGG CCGCGGCCAA CCCGAAGATC
GTCTATCTCG GCGCCTTCGG CTATGGCGAA GAGGGCCCCT ATGCCGGCAA GCCCGCCTAC
GACGACCTGA TCCAGGGCGC GGCCGGCGTC GCTTCGCTGT TCGCGCAGCA AAGCGGCGGT
GCGCCGCGCT ACGCGCCCGT CACGCTGGCC GACCGTGCCG TGGGGCTGCA GGCCGCCATC
GCGCTGCTCG CGGCCGTGCT GCACGCGCAG CGCACGGGCC GCGGCCAGGC GGTCGAGGTG
CCGATGTTCG AGGCGCTCTC GCAGTTCGTG ATGGGCGACC ACCTGGGCGG CCACAGCTTC
GAGCCGCCGC TCGGTCCCAC CGGCTATGCG CGCCTGCTCG CTGCGCACCG CAAGCCCTAC
GCCACAGCCG ACGGCTACCT GAGCGTGCTG ATCTACAACG ACAAGCACTG GCAGGCCTTC
TTCGACCTGA TCGGCCGGCC CGAGCTGCGC GCCTCGCCGA TGTTCGGCAC GCACACGGCG
CGCGCCGCGA ACATCGGCGC GGTCTATGCG TTCGTGGCCG AGGTGATGGC CACGCGCGGC
AGCGATGAAT GGATGGCGCT GCTGGAAGCG GCCGACATTC CGGTCGCGCG CCTGCACAGC
ACCGAGAGCC TGATCGACGA TCCGCACCTG CGCGCGGTCG ATTTCTTTCC CGAGTTCGAC
CACCCGAGCG AAGGCCGCAT CCGCACGCTC GCGCCGGTCG GACGCTACAG CGCCACGCCC
GCGGGCATCC GCCGCATGGC GCCGCGCATC GGCGAGCAGA GCGTCGAGCT GCTGCGCGAA
GCGGGCTATG GCGATGAAGC CATCGACCAC CTGCTCGCGC GCGGCGTCAC GCTGCAGCCG
GCTCCACCCA AGGACAACGA CGAATGA
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| Protein sequence | MNATGPLQGI RILDLTAVVM GPYATQTLGD LGADIVKVEP PSGDNLRAVG PMRHAGMGAM
ALHLNRNKRS IVLDLKQPEG REACLRLAAG CDALIYNTRP QAMARLGLGY EAVAAANPKI
VYLGAFGYGE EGPYAGKPAY DDLIQGAAGV ASLFAQQSGG APRYAPVTLA DRAVGLQAAI
ALLAAVLHAQ RTGRGQAVEV PMFEALSQFV MGDHLGGHSF EPPLGPTGYA RLLAAHRKPY
ATADGYLSVL IYNDKHWQAF FDLIGRPELR ASPMFGTHTA RAANIGAVYA FVAEVMATRG
SDEWMALLEA ADIPVARLHS TESLIDDPHL RAVDFFPEFD HPSEGRIRTL APVGRYSATP
AGIRRMAPRI GEQSVELLRE AGYGDEAIDH LLARGVTLQP APPKDNDE
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