| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4710 |
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| Symbol | |
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| ID | 7971720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5005208 |
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| End bp | 5006128 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795295 |
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| Product | pyruvate carboxyltransferase |
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| Protein accession | YP_002946581 |
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| Protein GI | 239817671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCC CCGCCAAGGT CCAGATCATC GACGTCGGTC CGCGCGACGG ACTGCAGAAC
GAGAAGCAAC CGGTCTCCGC CGAAATCAAG ATCGGCCTCG TGCACCGCCT GCAGGACGCC
GGCCTGAAGG AGATCGAGGT CACCAGCTTC GTGAGCCCCA AGTGGGTGCC GCAGATGGCC
GACAACGCCG AGGTGATGCA CGGCATCCGG CGCAAGCCCG GCGTGCGCTA TTCGGTGCTC
ACGCCCAACA TGAAGGGCTT CGAGGCCGCC ATTGCTGCCC CGCGCGAGGA GTGGCCTGAC
GAGATCGTGA TGTTCGGCGC CGCGAGCGAG GCCTTCAGCC AGAAGAACAT CAACTGCTCC
ATTGCCGAAA GCATCGAGCG CTTCGCGCCC GTGGTGGCCG CGGCGCGCGA GAAGGGCATC
GATGTGCGCG GCGCCATGTC GTGCACCGTG GGCTGCCCGT ATGAAGGCGA GGTCGCACCC
GAGCGCGTGG GCATGCTGGC AAAGCTGATG AAGGACATCG GCGTGCAGCG CGTGGACGTG
GCCGACACCA TCGGCGTGGG CACGCCGCGC AAGGTGAAGG CCGCCATCGA GGCCACGCTG
GCGCACTTCG GCGTGGACCA CATCTCGGGC CACTTCCACG ACACCTACGG CCAGGCGCTG
GTCAACACGC TGGCCTCGCT GGAGCTGGGG GTCTGGAACT TCCAGTCGTC CTCCGCGGGC
CTCGGCGGCT GTCCCTATGC CAAGGGCGCG ACCGGCAACG TGGCCACCGA AGACGTGGTC
TACATGCTGC ACGGCATGGG CATCGAAACC GGCATCGACC TGGACAAGCT GATCGACGCC
GGCGTGTACA TCAGCGAGGC GCTGGGGCGC GAGCCGAACT CGCGCGCCTC GAAGGCCCTG
CGCATCAAAC GGGCGGGTTG A
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| Protein sequence | MKLPAKVQII DVGPRDGLQN EKQPVSAEIK IGLVHRLQDA GLKEIEVTSF VSPKWVPQMA
DNAEVMHGIR RKPGVRYSVL TPNMKGFEAA IAAPREEWPD EIVMFGAASE AFSQKNINCS
IAESIERFAP VVAAAREKGI DVRGAMSCTV GCPYEGEVAP ERVGMLAKLM KDIGVQRVDV
ADTIGVGTPR KVKAAIEATL AHFGVDHISG HFHDTYGQAL VNTLASLELG VWNFQSSSAG
LGGCPYAKGA TGNVATEDVV YMLHGMGIET GIDLDKLIDA GVYISEALGR EPNSRASKAL
RIKRAG
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