| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4696 |
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| Symbol | |
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| ID | 7971706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4986047 |
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| End bp | 4987141 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795281 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_002946567 |
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| Protein GI | 239817657 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAG AACCCTTGGT GCGCTTCCAG CGTGTCCAGA AGACCTACGA CGGCGAGCAC
CTGGTGGTGC GCCAGCTCGA CCTGGACATC CACCGCGGCG AGTTCCTGAG CCTGCTCGGC
CCTTCGGGTT CGGGCAAGAC CACCACGCTG ATGATGCTGG CGGGCTTCGA GTCGCCGACC
TCGGGCGAGA TCCTGCTCGA CGGCAAGCCG ATCACCGGCA CGCCGCCGCA CAAGCGGAAC
TTCGGCATGG TGTTCCAGAA CTACGCGCTG TTTCCGCACC TGAGCGTGGG GCAGAACGTG
GCGTATCCAC TGACCGTGCG CAAGGTGCCC AGGGCCGAGC AGCAGCGCCG CGTGCAGCGC
GCGCTCGACA TGGTGCAGCT GCGCGGCATG ACCGACCGCC TGCCCGGCCA GCTCTCGGGC
GGCCAGCAGC AGCGCGTGGC GCTGGCGCGC GCGCTGGTGT TCGAGCCCCA GCTGGTGCTG
ATGGACGAGC CGCTCGGCGC GCTCGACAAG CAGCTGCGCG AGCACATGCA GCTCGAGCTC
AAGGACCTGC ACCGCCAGCT GGGCGTGACC TTCGTCTACG TGACGCACGA CCAGGGCGAG
GCGCTCACCA TGAGCGACCG CGTCGCGGTG TTCAACGAAG GCGTGATCCA GCAGCTGGAC
ACGGTCGACG GGCTGTACGA GACGCCGTCC AACCGCTTCG TGGCCGGCTT CGTCGGCGAC
AGCACGGTGC TCAAGGGCCA GCTGGGCCGC GGCGGCGAGC GCGCCGAGAT GACGCTGCCC
GACGGCCGCG TGCTGCACGG GCTCAACGTC GGCGGTGCGG CCGCGGGCGC GGCTGTGGAG
GCCTGCATCC GCCCCGAGCG CGTGGTGCTG CACCGCGGCC CGGCCGCACA GGGCGCCAAC
ATGCTCGCCG CCCAGGTGTC GCGCGTCATC TACTTCGGCG ACCACCTGCG GCTGCTGTGC
AGCGTGGGCG ACGGCCAGGC CGACGCCACC GTGAAGCTGC CGCTCGATGG CGCGGGCGGC
ACCGCCGCAC CGCAGGCCGG CGAAGCGGTG GTGCTCGAAT TCCCGATGGC GCATGCGCGC
ATCTATGCCC ACTGA
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| Protein sequence | MTAEPLVRFQ RVQKTYDGEH LVVRQLDLDI HRGEFLSLLG PSGSGKTTTL MMLAGFESPT
SGEILLDGKP ITGTPPHKRN FGMVFQNYAL FPHLSVGQNV AYPLTVRKVP RAEQQRRVQR
ALDMVQLRGM TDRLPGQLSG GQQQRVALAR ALVFEPQLVL MDEPLGALDK QLREHMQLEL
KDLHRQLGVT FVYVTHDQGE ALTMSDRVAV FNEGVIQQLD TVDGLYETPS NRFVAGFVGD
STVLKGQLGR GGERAEMTLP DGRVLHGLNV GGAAAGAAVE ACIRPERVVL HRGPAAQGAN
MLAAQVSRVI YFGDHLRLLC SVGDGQADAT VKLPLDGAGG TAAPQAGEAV VLEFPMAHAR
IYAH
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