| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4695 |
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| Symbol | |
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| ID | 7971705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4984731 |
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| End bp | 4986023 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795280 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_002946566 |
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| Protein GI | 239817656 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCG AACCCCACCT CAGCAATGCC GCCCTCATGG CCCGCCGCAA TGCGGCCGTG
GCCCGCGGCG TCGGCCAGGC CCATGAGATC TTCGTCAGCC GCGCCGCCAA CGCGGAAGTG
TGGGACGTCG AGGGGCGACG CTACATCGAC TTTGCCGGCG GCATCGCGGT GCTCAACACC
GGCCACTGCC ATCCGGAGAT CAGCGCCGCC GTGAAGGCGC AGGTCGATCT TTATTCGCAC
ACCTGCTTCC AGGTGCTGGC CTACGAGCCC TACGTGGAGC TGGCCGAGCG CCTGAACGCG
CTGGCGCCGG GCAATTTCGC GAAGAAGTCG ATCTTCCTGA GCACCGGCGC CGAGGCGGTC
GAGAACGCGG TCAAGATCGC CCGCGCCCAC ACCCGGCGGC CCGGCGTCAT TGCCTTCAAC
GGCGGCTATC ACGGCCGCAC CATGATGACG CTCGGCCTGA CCGGCAAGGT GGCGCCCTAC
AAGCTCGGCT TCGGCCCGTT CCCGGGCGAG GTGTTCCATG CGCTGTACCC GAACGTGCTG
CACGGCGTGA GCGTGGACGA TGCACTGCAT TCGGTCGAGC TGCTGTTCAA GAACGACATC
GAGCCCGAGC GCGTGGCGGC CTTCATCCTG GAGCCGGTGC AGGGCGAGGG CGGCTTCTAC
GTGGCGCCCA ACGACTTCGT CGAGGGCCTG CGCGCGCTGG CGGACCGCCA CGGCATCCTG
ATCATCGCCG ACGAAGTGCA GACCGGCGCC GGGCGCACCG GCACCTGGTT TGCGAGCGAG
CAGTGGCCGG TGGCGCCGGA CCTGATCACC ACCGCCAAGT CGATGGCGGG CGGCTTTCCG
ATCTCCGGCG TGGTGGGCCG CGCCGAGGTG ATGGATGCGC CCGCGCCCGG CGGCCTGGGC
GGCACCTATG CGGGCAGCCC CATCGGCTGC GCCGCGGCGC TCGCGGTGCT CAAGGTGTTC
GATGACGAGC AGTTGCTGGC GCGCAGCCGG GCGCTGGGCG GGCGGCTCAC GGCCGGGTTG
CGCCGCATCG CCGCCGGGGT GCCGGCCATC GGCGACGTGC GCGGGCTCGG CGCCATGGTG
GCGATCGAGC TGTTCGAAGA CGGCGACACC GCGCGGCCTG ACGCCGGGCT GACCCGCCGG
GTGGTCGCGG AGGCGGCGCG GCGCGGGTTA ATCCTGCTGT CATGCGGCAC CTATGGCAAT
GTAATTCGCG TGCTGGTGCC GCTCACGGCA TCCGACTTGC TTGTGGACGA AGGCCTGGCG
CTTCTCGCGG ACAGCTTCGC CGCGCTGCGC TGA
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| Protein sequence | MQREPHLSNA ALMARRNAAV ARGVGQAHEI FVSRAANAEV WDVEGRRYID FAGGIAVLNT
GHCHPEISAA VKAQVDLYSH TCFQVLAYEP YVELAERLNA LAPGNFAKKS IFLSTGAEAV
ENAVKIARAH TRRPGVIAFN GGYHGRTMMT LGLTGKVAPY KLGFGPFPGE VFHALYPNVL
HGVSVDDALH SVELLFKNDI EPERVAAFIL EPVQGEGGFY VAPNDFVEGL RALADRHGIL
IIADEVQTGA GRTGTWFASE QWPVAPDLIT TAKSMAGGFP ISGVVGRAEV MDAPAPGGLG
GTYAGSPIGC AAALAVLKVF DDEQLLARSR ALGGRLTAGL RRIAAGVPAI GDVRGLGAMV
AIELFEDGDT ARPDAGLTRR VVAEAARRGL ILLSCGTYGN VIRVLVPLTA SDLLVDEGLA
LLADSFAALR
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