| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4687 |
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| Symbol | |
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| ID | 7972898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4975903 |
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| End bp | 4976706 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795272 |
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| Product | protein of unknown function DUF990 |
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| Protein accession | YP_002946558 |
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| Protein GI | 239817648 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCCC TCCCTCTCTT CTTCCGCCTC ATGGCCGCCT CCATCAGCGG CCAGGCCAGG
TACCCGGCGT CCGCCCTGCT GCTGACCCTG GGCCAGTTCC TCGGCACAGG CATCGAGGTG
GTTGCCGTCT GGGCGCTGTT CCATCGCTTC GGCGAAGTGC AGGGCTGGGC CATCGGCGAA
GTGGCGCTGT TCTACGGTCT GGTCAACTGC ATGTTCGCGA TTGCCGACGC GCTGGGGCGC
GGCTTCGACG TGCTCGGCAC CGAGTTCCTG CGCACCGGCA CTTTCGACCG GTTGTTGCTG
CGCCCCCGCC CGCTGGCGTT GCAGCTCATG GGCCACGACG TGCGCATCAG CCGCCTGGGC
CGTCTGCTGC AGGGCCTGCT CGTGCTGGTC TTCGCAACCG TGCAGGCCGA CATCGCATGG
ACGCCCGGCG CCGTGGCCGT CGCGCTGTTC GCCATGGCCG GCGGCATCGC GCTGTTCCTC
GGCATCCTGG TGCTGCAGGG CACGCTGTCG TTCTGGACCG TCGAGAGCCT GGAGATCGCC
AACGTGCTCA CCTACGGTGG CGTGCAGGCG GCGCAGTACC CGCTGGCGCT CTATGCGCAG
TGGTTCCGGC GCGTCCTGAC CTTCATCGTA CCGCTGGCCT GCGTGGCGTA CTACCCGGCG
CTCGTGATCC TCGGCAAGCC GGATCCGCTG GGCGCGCCCG CCTGGGTGGG CATGGTGTCG
CCGCTCGCAG GCTTCGCGTT CCTCGCGGCG GCTTTCGGCG CATGGCGCAT CGGGCTGCGC
CACTACGCCT CGACGGGCAG CTGA
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| Protein sequence | MGALPLFFRL MAASISGQAR YPASALLLTL GQFLGTGIEV VAVWALFHRF GEVQGWAIGE
VALFYGLVNC MFAIADALGR GFDVLGTEFL RTGTFDRLLL RPRPLALQLM GHDVRISRLG
RLLQGLLVLV FATVQADIAW TPGAVAVALF AMAGGIALFL GILVLQGTLS FWTVESLEIA
NVLTYGGVQA AQYPLALYAQ WFRRVLTFIV PLACVAYYPA LVILGKPDPL GAPAWVGMVS
PLAGFAFLAA AFGAWRIGLR HYASTGS
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