| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4683 |
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| Symbol | |
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| ID | 7972894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4971223 |
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| End bp | 4972662 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795268 |
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| Product | S-adenosyl-L-homocysteine hydrolase |
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| Protein accession | YP_002946554 |
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| Protein GI | 239817644 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
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| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.355652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTG TTCTCAAGCC CACCCCCGTT TCCACCGCCG ACCAGGCGAT TGCCGACCTT
TCCCTGGCCG CCTGGGGCCG CAAGGAAATC AAGATCGCGG AAACCGAAAT GCCCGGCCTG
ATGGCCATCC GCGAGGAATT CTCGAAGGCG CAGCCGCTCA AGGGCGCGCG CATCACGGGC
TCGCTGCACA TGACGATCCA GACGGCCGTG CTGATCGAGA CGCTGCAGGC GCTCGGCGCC
ACCGTGCGCT GGGCTTCGTG CAACATCTTC TCGACGCAGG ACCACGCCGC CGCCGCGATT
GCCGCCGCCG GCACGCCGGT GTTCGCGATC AAGGGCGAGT CGCTGAAGGA CTACTGGGAC
TACACCCACG CCATCTTCGA CTTCGGCCCC AAGGGTTCGC AGGGCGAAGG CCCCAACATG
ATCCTGGACG ACGGCGGCGA CGCCACGCTG CTGATGCACC TGGGCCAGCG CGCCGAGAAG
GACCTGGGCG TGCTGTCCAA GCCCACCAGC GAGGAAGAAC GCATCCTCTA CGCGGCCATC
AAGGCCAAGC TGGCGGTCGA TCCGACCTGG TACACCCGCA AGTCGGCCGA GATCATCGGC
GTGACCGAGG AAACGACCAC CGGCGTGCAC CGCCTGAACG AGATGAGCGC CAAGGGCACG
CTGCTGTTCC GCGCCATCAA CGTGAACGAC TCGGTCACCA AGAGCAAGTT CGACAACCTC
TACGGCTGCC GCGAATCGCT GGTGGACGGC ATCAAGCGCG CGACCGACGT GATGATCGCC
GGCAAGGTGG CCTGCGTGGC CGGCTACGGC GACGTGGGCA AGGGCTCGGC TCAGGCCCTG
CGCGCGCTGA GCGCCCAGGT GTGGGTCACC GAAATCGACC CCATCAACGC GCTGCAGGCC
GCGATGGAAG GCTACAAGGT CGTCACCATG GAATATGCCG CCGACAAGGC CGACATCTTC
GTGACCACCA CGGGCAACCG CGACGTGATC CGCCACGAGC ACATGGCCGC CATGAAGGAC
CAGGCGATCG TCTGCAACAT CGGCCACTTC GACAACGAGA TCGATGTTGC GTCGATCGAG
AAGTACGAGT GGGAAGAGAT CAAGCCGCAG GTCGACCACA TCACCTTCCC CGACGGCAAG
AAGATCATCC TCCTGGCCAA GGGCCGCCTC GTGAACCTGG GCTGCGGCAC GGGCCATCCG
AGCTTCGTGA TGTCGTCGTC GTTCGCCAAC CAGACCATCG CCCAGATCGA GCTCTTCACC
AAGCCCGACG CCTACCAGGC CGGCAAGGTC TACGTGCTGC CCAAGCACCT CGACGAAAAG
GTCGCGCGCC TGCACCTGAA GAAGGTCGGC GCGATGCTGA CCGAGCTGAC GGACGAGCAG
GCCGCCTACA TCGGCGTGAG CAAGAACGGC CCCTACAAGC CGGACACGTA CCGGTACTGA
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| Protein sequence | MSAVLKPTPV STADQAIADL SLAAWGRKEI KIAETEMPGL MAIREEFSKA QPLKGARITG
SLHMTIQTAV LIETLQALGA TVRWASCNIF STQDHAAAAI AAAGTPVFAI KGESLKDYWD
YTHAIFDFGP KGSQGEGPNM ILDDGGDATL LMHLGQRAEK DLGVLSKPTS EEERILYAAI
KAKLAVDPTW YTRKSAEIIG VTEETTTGVH RLNEMSAKGT LLFRAINVND SVTKSKFDNL
YGCRESLVDG IKRATDVMIA GKVACVAGYG DVGKGSAQAL RALSAQVWVT EIDPINALQA
AMEGYKVVTM EYAADKADIF VTTTGNRDVI RHEHMAAMKD QAIVCNIGHF DNEIDVASIE
KYEWEEIKPQ VDHITFPDGK KIILLAKGRL VNLGCGTGHP SFVMSSSFAN QTIAQIELFT
KPDAYQAGKV YVLPKHLDEK VARLHLKKVG AMLTELTDEQ AAYIGVSKNG PYKPDTYRY
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