| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4678 |
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| Symbol | rplM |
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| ID | 7972889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4967276 |
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| End bp | 4967707 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795263 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_002946549 |
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| Protein GI | 239817639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.44664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAAAA CGTTCAGCGC CAAGCCCGCG GACGTGACGC ACGAGTGGTT TGTGATTGAC
GCGACCGACA AGGTCCTCGG ACGAGTAGCC AGCGAAGTTG CTCTCCGTTT GCGCGGCAAA
CACAAGGCCA TTTACACGCC TCACGTCGAT ACCGGTGACT TCATCGTCAT CATCAACGCA
GCCCAGCTGC GCGTCACCGG CGCCAAGCCG ATCGACAAGG TCTACTACCG TCACTCGGGC
TACCCGGGCG GTATCACGGC CACGAACTTC CGCGACATGC AAGCCAAGCA CCCGGGCCGC
GCCCTGGAAA AGGCCGTCAA GGGCATGCTG CCCAAGGGCC CGCTCGGCTA CGCGATGATC
AAGAAACTCA AGGTGTACGG TGGTGCAGAG CACCCGCATA CCGCCCAACA GCCCAAAGTG
CTGGAACTGT AA
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| Protein sequence | MTKTFSAKPA DVTHEWFVID ATDKVLGRVA SEVALRLRGK HKAIYTPHVD TGDFIVIINA
AQLRVTGAKP IDKVYYRHSG YPGGITATNF RDMQAKHPGR ALEKAVKGML PKGPLGYAMI
KKLKVYGGAE HPHTAQQPKV LEL
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