| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4675 |
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| Symbol | |
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| ID | 7972886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4964794 |
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| End bp | 4966224 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795260 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002946546 |
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| Protein GI | 239817636 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.610966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCG CCGCCACGGC CATCGATCCT GCCCGCAAGA GCCTGCTCTG GCTCGTGGCG
ATCGGCTTCT TCATGCAGAC GCTCGACGCC ACCATCATCA ACACCGCGCT GCCCGCCATG
GCCGCGAGCC TTGGCGAAAG CCCGCTGCGC ATGCAGTCGG TGGTGGTGGC CTACGCGCTG
ACCATGGCAA TGCTGATTCC GGCCTCGGGC TGGATCGCCG ACCGGTTCGG CACGCGGCGC
GTGTTCTTCT CGGCCATCGT GCTGTTCGTC GTCGGCTCGG TCCTGTGCGC CTTGTCGGTG
GGCGTGGGGC AGCTGGTGGC TGCGCGGGTG GTGCAGGGCC TGGGCGGCGC CTTGCTGCTG
CCGGTAGGGC GGCTGACGCT GCTGCGCACG GTGCCGCGCG GGGAGTTCCT GCAGGCGATG
AGCTTCGTTG CCATTCCGGG GCTGATCGGG CCGCTGCTCG GGCCCACGCT GGGCGGCTGG
CTGGTGCAGT ACGCCTCCTG GCACTGGATC TTCCTGATCA ACGTGCCTGT GGGGTTGGCG
GGCTGCCTGG CAACGCTGCG CTTCATGCCC GACCTGCGCG GGGCCATCCA GCGCCGCTTC
GATGGCGCGG GCTATGCGAT GCTGGCCTTC GGCATGGTTG CGATCTCGCT GGCGCTCGAC
GGTGTCTCGG GCGCGGGGCT GCGCCAGGTC AGCGTGCTGC TGTTGCTGGT GTTCGGCTTT
GCGAGCGTGG TGGCCTATTG GCTGCATGCC GCGCGCCGGC CCGAGCCGCT GTTCTCGCCC
TCGCTGTTCG GCGTGCCCAC GCTCAGCATC GGCTTGCTCG GCAACCTGTT CTCGCGGCTC
GGCAGCAGCT GCATGCCGTT CATGGTGCCC CTGCTGCTGC AGGTGTCGCT GGGCTATTCG
CCGCTTCGGG CGGGGCTCAT GATGCTGCCG ATCGCGCTGG CCGGCATGGC CATGAAGCGT
TTCGCGACCC CGCTGATCAC GCGCCACGGC TACCGCAAGG TGCTGGTGGC CAACACCGTG
CTGGTGGGCC TGGCGATGGG CAGCTTCGGC CTGACCGGGC CGGACCAGCC GGCCGCGCTG
CACATCCTGC AGTTGCTGGC CTTCGGCGCC GTCAACTCGC TTCAGTTCAC GGCCATGAAC
ACCATCACGC TGAAGGACCT GGACGGCAGC ATGGCCAGCA GCGGCAACAG CCTGCTCTCG
ATGGTCCAGA TGCTTGCAAT GAGCCTTGGC GTGGCGGCCG CGAGCGCAGT GCTGGCCGGC
TACAACGGTG TTTCTGGTCT CGAGACGGCA AAGCAGACGC TCGATGCCTT TCAGGCCACT
TTTGCCACCA TGGGGCTCGT CACGATCGCT TCTGCGCTGA TCTTCTGGCA TTTGCCAGCA
GAAGTGCGCG CCGCCCATCC CGCCCAGCCC GAAGTTTCAG GCCAGGGGTG A
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| Protein sequence | MTSAATAIDP ARKSLLWLVA IGFFMQTLDA TIINTALPAM AASLGESPLR MQSVVVAYAL
TMAMLIPASG WIADRFGTRR VFFSAIVLFV VGSVLCALSV GVGQLVAARV VQGLGGALLL
PVGRLTLLRT VPRGEFLQAM SFVAIPGLIG PLLGPTLGGW LVQYASWHWI FLINVPVGLA
GCLATLRFMP DLRGAIQRRF DGAGYAMLAF GMVAISLALD GVSGAGLRQV SVLLLLVFGF
ASVVAYWLHA ARRPEPLFSP SLFGVPTLSI GLLGNLFSRL GSSCMPFMVP LLLQVSLGYS
PLRAGLMMLP IALAGMAMKR FATPLITRHG YRKVLVANTV LVGLAMGSFG LTGPDQPAAL
HILQLLAFGA VNSLQFTAMN TITLKDLDGS MASSGNSLLS MVQMLAMSLG VAAASAVLAG
YNGVSGLETA KQTLDAFQAT FATMGLVTIA SALIFWHLPA EVRAAHPAQP EVSGQG
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