Gene Vapar_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4674 
SymbolanmK 
ID7972885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4963650 
End bp4964777 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content72% 
IMG OID644795259 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_002946545 
Protein GI239817635 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGCG AACTGTTCAT CGGCCTGATG TCCGGCACCT CGCTCGACGG GGTCGACGGC 
GTGCTGGCCG ATTTCGCGGA TGGCCGCATC GCCGTGCGGG CCTATGCCAC GGCGCCCTTT
CCGGCCGCCT TGCGCGCCGA GCTGATGGCG CTCAACACCC CCGGCGACAA CGAACTCCAT
CGCGCCGCGC TGGCCGGCAA CGGCCTGGCC CGGCTCTATG CCGGCGTCGC CAGCCAGCTG
CTGGCGGACA GCAGCACTCC CGCCAGCCAG GTGGCGGCCC TCGGCGCGCA CGGACAGACG
GTGCGCCACC GGCCCACCGA GTTCGACGGC GTCGGCTACA CCCTGCAAAT CAACAACCCC
TCGCTGCTGG CCGAGCTGAC CGGCATCGAC GTGGTGGCGG ACTTCCGCAG CCGCGACCTG
GCCGCCGGCG GACAGGGCGC GCCGCTGGTG CCGGCCTTCC ACCGCGCACT GTTCGCGCGC
GCGGGCCAAC CCGTGGCGGT GCTGAACATC GGCGGCATTT CCAACCTGAG CCTGCTGCCC
GCGGCCGATG CGCCGGGAGA GCCGGCGGTG CTCGGCTTCG ACTGCGGCCC CGGCAATGCC
CTGATGGACC ACTGGAGCCA GCTTCACACC GGCCAGCCCT TCGACCGCGG CGGCCGGTGG
GCCGCCAGCG GACAGGTACT GCCCGGCCTG CTCGCACGGC TGCAGGCCGA TCCGTATTTT
GCGAAGGCGC CTCCCAAGAG CACCGGGCGC GACCTGTTCA ATCCCGCATG GCTTTCCGCC
TGCCTGGCCC CGGCCATCGG CGCGGCGCCC GCCGACGTGC AGGCCACCCT GACCGAATTC
ACCGCCAGCG TATGTGCAGC CGACGTCCTC CGCTATGGAA GCGATAGCAA GCTGCTGATC
GTCTGCGGCG GCGGAGCGCT GAACGACCAT CTGATCGAGC GCCTGCGCGC GCACTTGCCC
GGCGTGGAAG TGGCCGCCTC CACGGCCCAC GGCCTGCCTC CGCTGCAGGT CGAGGCCGCG
GCCTTTGCCT GGCTGGCCCG CAGCACCCTG CGGCGCGAAG CCGGCAACCT GGCCAGCGTG
ACAGGCGCAA GAGGCGGGCG CGTGCTCGGG GCGATCTATC CGGCCTGA
 
Protein sequence
MAGELFIGLM SGTSLDGVDG VLADFADGRI AVRAYATAPF PAALRAELMA LNTPGDNELH 
RAALAGNGLA RLYAGVASQL LADSSTPASQ VAALGAHGQT VRHRPTEFDG VGYTLQINNP
SLLAELTGID VVADFRSRDL AAGGQGAPLV PAFHRALFAR AGQPVAVLNI GGISNLSLLP
AADAPGEPAV LGFDCGPGNA LMDHWSQLHT GQPFDRGGRW AASGQVLPGL LARLQADPYF
AKAPPKSTGR DLFNPAWLSA CLAPAIGAAP ADVQATLTEF TASVCAADVL RYGSDSKLLI
VCGGGALNDH LIERLRAHLP GVEVAASTAH GLPPLQVEAA AFAWLARSTL RREAGNLASV
TGARGGRVLG AIYPA