| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4673 |
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| Symbol | |
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| ID | 7972884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4962278 |
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| End bp | 4963618 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795258 |
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| Product | Peptidase M23 |
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| Protein accession | YP_002946544 |
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| Protein GI | 239817634 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCAACG GCATTCTCGC CGCCGAGGAG CTTTTGGCTT CTCGCGTGGC CTATACATTC
CGGACCTATC CCAAGCAGAT CACCGCGCTC ATCGCGGCTG CCTTGCTGAG CGCCGGAACC
CTGGCGGTGG CCTCCCTGGG CCCCGACGCC GCCGACCTCC CGGTGCAGCA GGTCCTCGAA
GCGACCGCTC CGCTGTCTTT CGCCGAACAG AGCGAATCGC TGGAAAACTT CAGCTTCACG
CTGTTTCGCA CCGACATCAC GCGCTCCAGC GACACGGCCG AGGCCCTGCT GAAGCGCCTG
GGCATCTCCG ACCCGGCCGC CACCGCCTTC GTGCGCGGCA GCAGCGAAGC CCGCAATGCC
CTGTTCGCCC GCGCCGGGCG CACCGTCACA GCCGAAGCCA CGCAGGAAAA CCAGCTCAAG
AAGCTGAGCG CCCGCTGGAT TCCCGATGGC GACGGCGGTT TCAAGCGCTT CGTCATCGAG
CGCACGCCGG TCGGCTTCGT GGCGCTCACC GAACGCGACA CGCTGACGCC GGGCACGCGC
CTGGCCAGCG GCGTCATCCG CACCTCGCTG TTCGCCGCCA CCGACGACTC CCGCGTGCCC
GACGCGGTCG CCAGCCAGCT GGCCGACATC TTCGCGGGCG ACGTCGACGT GCGCGCGCTG
CGCAAGGGCG ACCGCTTCGC CGTGGTCTAC GAAACCTTCG AGGCCGACGG CCAGGCGCTG
CGCAGCGGCC GCGTGCTCTC GGCCGAGTTC GAGAGCGGCG GCAAGGTGCA CCAGGCCGTG
TGGTTCCAGC CCCAGGGCCA AAAGGGCAGC TATTACCGCC CGAACGGCGA TAGCCTGCGC
AAGGCCTACC TGAGCTCGCC GGTCGAGTTC TCGCGCGTGT CGAGCGGCTT CGCAATGCGC
ATGCACCCGA TCCTCAACAG CTGGCGCCAG CACAACGGCA TCGACTTCGC AGCCCCCACC
GGCACCGCGG TGCGCAGCGT CGGCGACGGC ACGGTCGATT TCGCCGGCAC GCAAAGCGGC
TACGGCAACA TCGTCATCAT CAAGCACCGC AACAACCAGC AGACGGCTTA CGCCCACCTG
AGCCGCATCA ACGTCAAGGC CGGCGAGAGC ATCACCCAGG GCCAGACGAT CGGTGCCGTG
GGCTCCACCG GCTGGGCCAC CGGCCCGCAC CTGCACTTCG AATTCCGCGT GAACGGCGAA
TACCAGGATC CGACCTCCAT CGCCCAGGAG GGCGGCGCGC CCATCACGGC GTCCCTGCGC
CCGGCCTTCG AGCGCATTGC GGTCGGCGCG CGCACCGAGC TGGCGGCCGC CTTCTCGGTC
ATCCAGGCCA GCGCGGACTG A
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| Protein sequence | MINGILAAEE LLASRVAYTF RTYPKQITAL IAAALLSAGT LAVASLGPDA ADLPVQQVLE
ATAPLSFAEQ SESLENFSFT LFRTDITRSS DTAEALLKRL GISDPAATAF VRGSSEARNA
LFARAGRTVT AEATQENQLK KLSARWIPDG DGGFKRFVIE RTPVGFVALT ERDTLTPGTR
LASGVIRTSL FAATDDSRVP DAVASQLADI FAGDVDVRAL RKGDRFAVVY ETFEADGQAL
RSGRVLSAEF ESGGKVHQAV WFQPQGQKGS YYRPNGDSLR KAYLSSPVEF SRVSSGFAMR
MHPILNSWRQ HNGIDFAAPT GTAVRSVGDG TVDFAGTQSG YGNIVIIKHR NNQQTAYAHL
SRINVKAGES ITQGQTIGAV GSTGWATGPH LHFEFRVNGE YQDPTSIAQE GGAPITASLR
PAFERIAVGA RTELAAAFSV IQASAD
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