Gene Vapar_4664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4664 
Symbol 
ID7972875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp4955612 
End bp4956202 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content70% 
IMG OID644795249 
Producthypothetical protein 
Protein accessionYP_002946535 
Protein GI239817625 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACGA GCCAGCGCGT TCCGCACGAC ACGCCCATCG AATGCACCAG CGCCGCCGCA 
TGGGAGCGCT GGCTCAAGCG CCACCATGCC ACCGCGGCCG GCGTGTGGAT CCGCATGGCC 
AAGAAGGCCA GCGGCATCGC CTCCATCGAC CACCCCGCCG CGCTCGAGGT GGCGCTGTGC 
TACGGCTGGA TCGACGGCCA GCGCAAGGGC GACGGCGAGC AGCATTTCCT GCAGCGCTTC 
ACGCCGCGCA CGCCGCGCAG CACCTGGTCG AAGATCAACC GCGACAAGGC GCTGAAGCTG 
ATCGACGAAG GCCGCATGCA GCCCGCAGGC CTGGCCGAGG TGGAGCGTGC CCGCGCCGAT 
GGCCGCTGGG ACGCGGCCTA CGATGCCCAG AGCATCGCCG CCGTGCCGCC CGACCTGCAG 
GCCGCGCTCG ACGCCAACCC CAAGGCCGCC GCCTTCTTCG CCACGCTCGA TTCGCGCAAC 
CGCTATGCGG TGCTGTTCCG CACGCAGGGC GCGAAGAGGC CCGAGACGCG GGCAAAGCGC 
ATCGCGCAGT TCGTGGAAAT GCTGGCCAAG GGCGAGAAGA TCCATCCCTG A
 
Protein sequence
MSTSQRVPHD TPIECTSAAA WERWLKRHHA TAAGVWIRMA KKASGIASID HPAALEVALC 
YGWIDGQRKG DGEQHFLQRF TPRTPRSTWS KINRDKALKL IDEGRMQPAG LAEVERARAD 
GRWDAAYDAQ SIAAVPPDLQ AALDANPKAA AFFATLDSRN RYAVLFRTQG AKRPETRAKR 
IAQFVEMLAK GEKIHP