Gene Vapar_4662 details

Gene Information

• Locus tag: Vapar_4662
• ID: 7972873
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 4953985
• End bp: 4954665
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644795247
• Product: phospholipid/glycerol acyltransferase
• Protein accession: YP_002946533
• Protein GI: 239817623
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGCGCC GCGCACTGGC CGTGGTCGCG GGCAAGCTCA TCATCGGCGC GGCCGGCCTC 
CTGACCGGCG TGCGCGCCAT CTGGAGCGGC ACCACGCCCA AGGCCGAGCA GACGCTCTAC 
TTCGCCAACC ACACGAGCCA CGGCGACTTC GTGCTGCTGT GGGCCACGCT GCCGCCCGAC 
CTGCGCGCAC TCACGCGGCC GGTGGCCGGG CAGGACTACT GGATGGCTTC CAGGCTGCGC 
CAGTTCATTG GCGCCGACGT GTTCAACGCG CTCATGATCC GGCGCGACGG CTCGGGCCAG 
GGCGAGAACC CGGTCGAGCA GATGAAGGAG GCGCTGGACC GCGGCGACTC GCTCATCATG 
TTCCCCGAGG GCACGCGCAA TACCGGCGAC GAGATCCTGC TGCCGCTCAA GAGCGGCCTC 
TATCACCTGG CGCGCGCCTG CCCCAATGTG CGGCTGGTGC CGGTGTGGAT CGAGAACCTC 
AAGCGCGTGC TTCCCAAGGG CACGCTGGTG CCGATTCCGC TGGCGTGCAC GGTGCGCTAC 
GGCACGCCGA TCCGGCTCGA AGAAGGCGAA GACAAGAATG CCTTCATCGC CCGCGCGCGC 
GCCGCCATGC TCGACCTGCG GCCCGAGTAT GACCGCCTGC CCGAACAAGA AAAAGCAGCA 
GCAGCAACAG CAACGCCATG A 

 

Protein sequence

MLRRALAVVA GKLIIGAAGL LTGVRAIWSG TTPKAEQTLY FANHTSHGDF VLLWATLPPD 
LRALTRPVAG QDYWMASRLR QFIGADVFNA LMIRRDGSGQ GENPVEQMKE ALDRGDSLIM 
FPEGTRNTGD EILLPLKSGL YHLARACPNV RLVPVWIENL KRVLPKGTLV PIPLACTVRY 
GTPIRLEEGE DKNAFIARAR AAMLDLRPEY DRLPEQEKAA AATATP