| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4660 |
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| Symbol | |
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| ID | 7972871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4952155 |
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| End bp | 4953504 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795245 |
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| Product | Dual specificity protein phosphatase |
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| Protein accession | YP_002946531 |
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| Protein GI | 239817621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.817208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCC CGCCCGCACA ACGGCCCTGG AAGCGCGCAG CCGCCTGGCT CGTGTTCCTG
GGGCCGTTGT TCTATGCGAC CTACGGCCTG GCCAACTGGT GGGCCACCAC GCGCGCGCAG
GTGCCCTCGA TGGCCTTCGA GTGGGAGCGG CAGCTGCCGT TCTGGGCCTG GACGATCTTT
CCGTACTGGA CGATCAACGT CTTCTACGCA CTCTCGCTCT TTCTCGCGCG CAGCAGGCAC
ACGCTCGACC GGCATGCATT GCGGCTGGTG AGCGCAACGC TCATCGCCTG CACCTGCTTC
GTCATCTGGC CGCTGCATTT CAGCTTCGGG CAGCCGACCG TCGAGGGCGC GCCGGCCTTC
CTGTTCAACG CGCTGCGCGG CTTCGACCAG CCCTACAACC AGGCGCCTTC GCTGCACATC
GCGCTGGCGG TGATCCTGTG GGACTGGTAC CGGCAGTTCT TGCGCGCCAT GTGGGCAAGG
CTGGTGCTGC ATGTGTGGGC GTTCGCGATC TGCGCCTCGG TGCTCACGAC CTGGCAGCAC
CACTTCATCG ACATTCCGAC CGGCGCGCTG CTCGGGCTGT TCTGCGTGTG GCTTTGGCCG
CTGGAGCGCA CGGTTTCGAT GCCGCGCGCC TGGCGCTGCA CGCGCGATGC GCAGCGCTGG
AAGCTCGCGG GTTTCTACGC CGTGGGTGCG GCACTGTTCC TCGCCGTGGC CGTGCAGCTG
GGCGGCGTTG CGCTGTGGCT CGCCTGGCCT TCGGCCTCGC TGGCGCTGGT AGCGCTCAAC
TACGTCGGCT TCGGCGCCCG CGGCTTCCAG ATGGACGGCC AAGGCCGCAT GGGCTGGGCG
GCGCGCTGGC TGCTCGCGCC CTATCGCCTG GGCGCAGCCG TCAACGCATG GCTCTGGACG
CGCAAGCTGC CGGCCTTCGT CGAAGTGGTG CCGGGCCTGC TGCTCGGGCG GCAGCCCACG
CGCGCCGAAT GGATCGCCGC CGGCCGGCCC CGACTGGTGA GCCTGTGCGC CGAACTGCAG
ATGCCGGCCG GCGTGCCGCA TGCGCGCGGC GTGCCGATGC TCGACCTGAC CGTGCCGCCG
ACCGTGCGCC TGCAGCGCGC GGCCGCGGTC ATCGAAGGGC AGCGCCGCAA TGCCGACGGC
GCGGCCGTTT GGGTGTGCTG CGCGCTGGGC TTTTCGCGCA GCGCCGCCGC CGTGATCGCC
TGGCTGGGCC GCTATGGCGC GATGGGCGGA CTGGCGCAGG CCGAGGACGC CGTGCGGCTT
GCGCGTCCGC AGGTCGTGCT GCGGCCGGCG TGGCGGATAT CGCTCGCGCC ATTGGGCACC
GCCGCTTCGG GAGCACCACC CCATGACTGA
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| Protein sequence | MKPPPAQRPW KRAAAWLVFL GPLFYATYGL ANWWATTRAQ VPSMAFEWER QLPFWAWTIF
PYWTINVFYA LSLFLARSRH TLDRHALRLV SATLIACTCF VIWPLHFSFG QPTVEGAPAF
LFNALRGFDQ PYNQAPSLHI ALAVILWDWY RQFLRAMWAR LVLHVWAFAI CASVLTTWQH
HFIDIPTGAL LGLFCVWLWP LERTVSMPRA WRCTRDAQRW KLAGFYAVGA ALFLAVAVQL
GGVALWLAWP SASLALVALN YVGFGARGFQ MDGQGRMGWA ARWLLAPYRL GAAVNAWLWT
RKLPAFVEVV PGLLLGRQPT RAEWIAAGRP RLVSLCAELQ MPAGVPHARG VPMLDLTVPP
TVRLQRAAAV IEGQRRNADG AAVWVCCALG FSRSAAAVIA WLGRYGAMGG LAQAEDAVRL
ARPQVVLRPA WRISLAPLGT AASGAPPHD
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