| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4651 |
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| Symbol | |
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| ID | 7972862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4942838 |
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| End bp | 4944292 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795236 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_002946522 |
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| Protein GI | 239817612 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCT ACGAAGCCCT TGCCGCCGAC ATCGAGGCGT CGATCCGCCA CGGCACGCTC
AAGACCGGCG ACCGGTTGCC CTCGGTGCGG CACACCGGCG AGAGCCGAGG CGTGAGCGCC
TCCACCGTGT TCCAGGCGTA CTACCTGCTG GAGGCGCGCG GCCTGGTGCG CGCGCGGGAC
CGCTCGGGCT ACTACGTCAC CGGCGGCGGG CTGCGCGATG CGCCGCCCGA GGCCAACCTC
ACCTCGCGCC CGGCCGAGGG GCCCAGGTCG CTCGACGTGA GCGACCACGT GTTCGACATC
CTCGAGGCCA GCATGTCGCG CAAGGTGGTG CCCTTCGGCT CGGCGTTTCC GAGCCCGCTC
CTGTTTCCGC TGGCACGGCT GGGCCAGTTC ATGGCCGCGA GCGCCAAGTC GCTCGACCCG
TGGAGCACCG TGGACGACCT CACGCCCGGC AGCGCGGCGC TGCGCCGGCA GATTGCGCTG
CGCTACCTGG GCGACGGCAT GCAGGTGGCG GCCGACGAAA TCGTCGTCAC CAACGGCGCG
CTGGAGGCGC TCAACCTGTG CCTCGCGGCG GTCACGCGCC CCGGCGATTC GGTGATCGTC
GAATCGCCCA CCTTCTATGC GGCCCTGCAG GCGCTGGAGC GCATGGGCCT GCGCGCCATC
GAGGTGCCGA CGCATCCCGG CGAAGGCATC GACCTGGCCG CGCTGGAGCT TGCCATCGCG
GCCCACCAGC CCAAGGCCTG CTGGCTCATG ACCACCTTCC AGAACCCGCT CGGCAGCCTG
ATGCCCGACG CGAAGAAGAA GGCGCTGGTC GAACTGCTCG CACGGCACGC GCTGCCATTG
ATCGAGGACG ACGTGTACGC CGAGCTCTAC TTCGGCGACC GGCGCCCGCC GCCGGCCAAG
GCCTTCGACA CGCAGGGACT GGTGCTGCAT TGCTCGTCGT TCTCGAAATG CCTGGCACCG
GGCTACCGCA TCGGATGGGC ATCGGCCGGG CGCTTTGCGC GCAACGTGGC GCGCTTGAAG
CTGACGACCA CGCTCAGCAC CTCGGTGCCC GCGCAGCTCG CGCTCGCAAG CTACCTGGAA
AAAGGCGGCC TCGACAAGCA CCTGCGCAAG CTGCGCCAGG TCCTGGCCGT GCAGCAGGCG
AGCTTTGCGC AGGCAGTGGG CCACTACTTT CCCGCGGGCA CGCGCGCCAC GCGGCCGCTG
GGCGGCTACT TCATGTGGGT CGAGCTGCCG GCGCAGGTCG ATGCGCTCGC CATCCACGCC
CAGGCGCTGG AGCGCGGCAT CAGCGTGGCG CCCGGGCCCA TCTTCTCGGC CACGCGCGGC
TTCGCGCACT GCCTGCGCCT GAACTACGGG CATGCCTGGG ACGCGCAGAG CGAAAAGGCG
ATGCAGACCC TGGGGCGATT GGTGGCAGCC GCCGCGGCAG GCAGCCCGCC GCGCGAGAAA
ATCGCGCTGC CGTGA
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| Protein sequence | MKRYEALAAD IEASIRHGTL KTGDRLPSVR HTGESRGVSA STVFQAYYLL EARGLVRARD
RSGYYVTGGG LRDAPPEANL TSRPAEGPRS LDVSDHVFDI LEASMSRKVV PFGSAFPSPL
LFPLARLGQF MAASAKSLDP WSTVDDLTPG SAALRRQIAL RYLGDGMQVA ADEIVVTNGA
LEALNLCLAA VTRPGDSVIV ESPTFYAALQ ALERMGLRAI EVPTHPGEGI DLAALELAIA
AHQPKACWLM TTFQNPLGSL MPDAKKKALV ELLARHALPL IEDDVYAELY FGDRRPPPAK
AFDTQGLVLH CSSFSKCLAP GYRIGWASAG RFARNVARLK LTTTLSTSVP AQLALASYLE
KGGLDKHLRK LRQVLAVQQA SFAQAVGHYF PAGTRATRPL GGYFMWVELP AQVDALAIHA
QALERGISVA PGPIFSATRG FAHCLRLNYG HAWDAQSEKA MQTLGRLVAA AAAGSPPREK
IALP
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