| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4629 |
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| Symbol | |
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| ID | 7972839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4919165 |
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| End bp | 4920460 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795213 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_002946500 |
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| Protein GI | 239817590 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACG CTGACCAAAA CGACATTCTT TTCGAGCGCG CCCGCGCCGT CATTCCCGGC
GGCGTCAATT CGCCGGTGCG CGCCTTCAAG GCCGTGGGCG GCACGCCGCG CTTCATCCGC
CGCGCCGAGG GCGCCTATTT CTGGGACGCC AACGACAAGC GCTACATCGA CTACATCGGC
TCCTGGGGCC CGATGATCCT GGGCCACGGC CACCCCGCGG TGGTCGAAGC GGTGCAGAAG
GCCGTGCTCG AGGGCTTTTC CTACGGCGCG CCAACCGAGC GCGAGATCGA GCTGGCCGAA
GCCATCCTCG CCCTGATGCC GTCGATGGAG ATGGTGCGGC TCGTGAGCTC GGGCACCGAG
GCCGCCATGA GCGCGCTGCG CCTGGCGCGC GGCGCCACCG GCCGCAAGCA CATCATCAAG
TTCGAGGGCT GCTACCACGG CCATGCCGAT GCGCTGCTGG TGAAAGCCGG CTCCGGCCTT
GCCACCTTCG GCCACCCCAC TTCGGCCGGC GTGCCGCCCG AGGTCACGCA GCACACGCTG
GTGCTCGAAT ACAACAACAT CGCGCAGCTC GAGGAAGCCT TCGCGCTGCA CGGCAACGAC
ATCGCCTGCC TGATGATCGA GGCGATTGCC GGCAACATGA ACTTCGTGCG CGCCACGCCC
GCCTTCGCCG CCCGCTGCCG CGAGCTGTGC ACGCAGCACG GCGCGCTGCT GGTGTTCGAC
GAAGTGATGA CCGGCTTTCG CGTCGGCCTG CACGGCGCGC AGGGCGTGCT GGGCATCACG
CCCGACCTCA CGGTGCTCGG CAAGGTCATC GGCGGCGGCA TGCCGCTGGC GGCCTTCGGC
GGCCCGCGCG CCATCATGGA GCAGCTCGCG CCGCTCGGCC CGGTCTACCA GGCCGGCACG
CTGTCAGGCA ACCCGGTGGC CACGGCCTGC GGCCTTGCCA CGCTGAAGGA AATCTCGAAG
CCCGGCTTCT ATGAGGCACT CGGCAAGAAG ACGCGCTCGC TCGCCGACGG CCTCAAGGCC
GCCGCCGCCG CCGAAGGGCT GCCCTTCAAC GCCGACAGCG AGGGCGGCAT GTTCGGCTTC
TTCCTGATGA ACGAGCTGCC GCAGAACTAC GCGACCGTGA TGACCACCGA CAACGCGAAG
TTCAACGCGC TGTTCCACGG CCTGCTGGAG CGCGGCGTGT ACATCGCGCC GGCGCTCTAC
GAGGCCGGCT TCGTGAGCGC GGCGCATGGC GACGACGACA TTGCCGCAAC CATTGATGCG
GCGCGGCAGG TTTTCAGGAC GCTGCGCTCG CTCTGA
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| Protein sequence | MPNADQNDIL FERARAVIPG GVNSPVRAFK AVGGTPRFIR RAEGAYFWDA NDKRYIDYIG
SWGPMILGHG HPAVVEAVQK AVLEGFSYGA PTEREIELAE AILALMPSME MVRLVSSGTE
AAMSALRLAR GATGRKHIIK FEGCYHGHAD ALLVKAGSGL ATFGHPTSAG VPPEVTQHTL
VLEYNNIAQL EEAFALHGND IACLMIEAIA GNMNFVRATP AFAARCRELC TQHGALLVFD
EVMTGFRVGL HGAQGVLGIT PDLTVLGKVI GGGMPLAAFG GPRAIMEQLA PLGPVYQAGT
LSGNPVATAC GLATLKEISK PGFYEALGKK TRSLADGLKA AAAAEGLPFN ADSEGGMFGF
FLMNELPQNY ATVMTTDNAK FNALFHGLLE RGVYIAPALY EAGFVSAAHG DDDIAATIDA
ARQVFRTLRS L
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