| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4625 |
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| Symbol | |
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| ID | 7972835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4917071 |
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| End bp | 4917436 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795209 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_002946496 |
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| Protein GI | 239817586 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.635313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCATTC GAAAAATCCT CGTCGTCGAC GACTCCAAGA CGGAACTGGT GTTCCTCTCG
GACCTGCTCC AGAAGAACGG CTTTGCGGTC AAGACCGCCG AAAACGCCGA AGACGCCATG
CGCCGCCTCG AAGAGGACCA GCCCGACCTG ATCCTCATGG ACGTCGTCAT GCCCGGCCAG
AACGGCTTCC AGCTGACGCG CGCCATTGCC CGCGATCCGC AGTACGCCGC CATCCCGATC
ATCCTGTGCA CCAGCAAGAA CCAGGAAACC GATCGCGTCT GGGGCATGCG CCAGGGCGCC
CGCGACTACA TCGTGAAGCC GGTCAACGCG GCCGAGCTGA TGTCCAAGAT CAGCGCGCTG
GCCTGA
|
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| Protein sequence | MPIRKILVVD DSKTELVFLS DLLQKNGFAV KTAENAEDAM RRLEEDQPDL ILMDVVMPGQ
NGFQLTRAIA RDPQYAAIPI ILCTSKNQET DRVWGMRQGA RDYIVKPVNA AELMSKISAL
A
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