| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4618 |
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| Symbol | |
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| ID | 7972828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4903112 |
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| End bp | 4904659 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795202 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_002946489 |
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| Protein GI | 239817579 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGA TTTTACTGGC CGTCGACAAG ACCTATCCCA AAGGGCTCAT GTGGTTTCGC
CGCGACCTGC GCGTGGACGA CAACGCGGCG CTCTACCACG CGCTGCGGGC CTGCCGACAG
GTGGTGTGCG TTTTCGTGTT CGACCGGGCC ATCCTGGACC CGCTGCCCCG CATCGACCGG
CGCGTGGAAT TCATCCGGGA ATCGCTGGTC GAGCTCGAGG AAGAACTGCG GGCGCTGAGC
GGCGGGCTGA TCGTGCGGCA CGCCCACGCC ATCGAGGAGA TCCCGGCACT CGCGCACAGC
CTGGACGTGC AGGCCGTCTT CGCCAACCGC GACGACGAGC CCGATGCGCT GGCGCGCGAC
GCCCAGGTGC TGGGCGCCCT GGCCAACGCG GGCGTGAGCT TCTACACCTA CAAGGACTCC
ACCGTCTTCG AGCGCGACGA GCTGCTCAAC AAGACCGGCC AGCCGTACAC GGTGTTCACG
CCCTACAAGC GGGCCTGGCT CGCCAAGGTG GACGCCTTCT TCCTCAAGCC CTACCCGGTG
CGCAGCCATG CCGATGCGCT GGCGCCGCCG CCCGCGGCCC ATCGCACGCC GGCGCCTTCG
CTCGAGGACC TCGGCTTTGG CCGGAGCAAT CTCTCCGAGC TCGGCATTCC CACCGGCAGC
CAGGGCGCGG CGGCGCTGTT CGAAGACTTC TTCCAGCGCA TCGACCGCTA CGACGCCGCG
CGCAATTTTC CGGCGGTGCG GGGGCCGAGC TACCTGGGCG TGCACCTGCG CTTCGGCACC
GTCTCGATCC GGCAGCTGGC GGGGGTTGCG CACCAGCTCT TCCTGCAAGG CGACGCGGGC
GCGGCCGCCT GGCTGGGCGA GCTGATCTGG CGGGAGTTCT ATTTCCAGAT CCTGGTGCAC
TTTCCGCACG TGCATTCGGG CGGCGAGTCG AAGAGCTTCC GGCCCGAGTA CGACAAGATC
CAGTGGCACC ACGGCAAGCA TGCCGACCAG CTGTTCGAGG CCTGGTGCCA GGGCCGCACG
GGCTACCCGC TGGTGGACGC GGCCATGCTG CAGATCAACC AGAGCGGCTA CATGCACAAC
CGCCTGCGCA TGGTGGTGGC CAGCTTCCTC TGCAAGGACC TGGGGCTGGA CTGGCGGCGC
GGCGAACGCT ACTTTGCGCT GCACCTGAAC GACTTCGAGC TGGCTTCGAA CAACGGGAAC
TGGCAATGGG CCAGCTCCAG CGGCTGCGAC GCGCAGCCCT GGTTCCGCAT CTTCAACCCG
GTGACGCAGA GCGAGCGCTT CGACCCCGAA GGCAAGTTCA TCCGGCGCTA CCTGCCGCAG
CTCGCGGGAC TGTCGAATGC CGCGATCCAT GCGCCCTGGA CGGCATCGCC GGTGGAACTG
GAAGCCGCCG GCATCAAGCT CGGCGAGACC TACCCCAGGC CGGTGGTCGA CCACGCCGAG
GCGCGCGAGC AGACGATGCG GCGCTATGCG GCCGTGCGCG GCGCCGGCCA GCCGCCGCTC
AGCGGCGCGT CAGCACGATC TCCGCGCCGG CGTCGGAGCG GCCCCTGA
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| Protein sequence | MPPILLAVDK TYPKGLMWFR RDLRVDDNAA LYHALRACRQ VVCVFVFDRA ILDPLPRIDR
RVEFIRESLV ELEEELRALS GGLIVRHAHA IEEIPALAHS LDVQAVFANR DDEPDALARD
AQVLGALANA GVSFYTYKDS TVFERDELLN KTGQPYTVFT PYKRAWLAKV DAFFLKPYPV
RSHADALAPP PAAHRTPAPS LEDLGFGRSN LSELGIPTGS QGAAALFEDF FQRIDRYDAA
RNFPAVRGPS YLGVHLRFGT VSIRQLAGVA HQLFLQGDAG AAAWLGELIW REFYFQILVH
FPHVHSGGES KSFRPEYDKI QWHHGKHADQ LFEAWCQGRT GYPLVDAAML QINQSGYMHN
RLRMVVASFL CKDLGLDWRR GERYFALHLN DFELASNNGN WQWASSSGCD AQPWFRIFNP
VTQSERFDPE GKFIRRYLPQ LAGLSNAAIH APWTASPVEL EAAGIKLGET YPRPVVDHAE
AREQTMRRYA AVRGAGQPPL SGASARSPRR RRSGP
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