| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4613 |
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| Symbol | |
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| ID | 7972823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4899172 |
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| End bp | 4900455 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795197 |
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| Product | dihydroorotase |
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| Protein accession | YP_002946484 |
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| Protein GI | 239817574 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC TCATCTCCAA CGGCCGCGTC GTCGACCCCG CATCGGGCAC CGACAAGAAG
ACCGACATCG CCATTGCCGA CGGAAAAATC GCCGGCATCG GCCACACGCC GGCCGGCTTC
AAGGCCGAAC GCACTCTCGA TGCCACGGGC TGCGTGGTCG CGCCCGGCCT CGTCGACCTG
GCCGCGCGCC TGCGCGAGCC CGGCTACGAG CACGAAGGCA TGCTTGAAAG CGAAATGGCC
GCGGCCATCG CGGGCGGCGT CACCAGCCTC GTGTGCCCGC CCGACACCGA CCCCGTGCTC
GACGAGCCCG GCCTGGTCGA GATGCTCAAG TTCCGCGCCG AGAAGCTGCA GGGCGCACGG
CTCTTTCCGC TCGGCGCGCT CACGCGCAGC CTTGCGGGCG GCGTGCTCAC CGAAATGGCC
GAGCTCACCG AGGCCGGCTG CATCGGCTTC AGCCAGGCCG ACGTACCGCT CGCAGACACC
CAGGTGCTGC AGCGTGCGCT GCTCTACGCG AGCACCTTCG GCTACACCGT GTGGCTGCGC
CCGCAGGACC GCGACCTTGG CAAGGGCGTG GCGGCCAGCG GCCCGCTGGC CACGCGCCTG
GGCCTCTCGG GCGTGCCGGT GTCGGCCGAA ACCATCGCGA TCTTCACCAT CGTCGAGCTC
ATGAAGAGCA CCGGCGCGCG CGTGCACCTG TGCCGCATCT CCAGCGCCGC GGGCGTGGCG
CTGGTGCGCG CGGCCAAGGC GCAGGGCCTG CCGCTCAGCT GCGACGTCAG CATCAATTCG
CTGCACCTGG CCGACACCGA CATCGGCTTC TTCGACAGCC GCGCGCGCCT CAACCCGCCG
CTGCGCCAGC AGGGCGACCG CGACGCGCTG TCGGCCGCGC TGGCCGACGG CACCATCGAT
GCGCTGGTGT CCGACCACAC GCCGGTCGAG GCCGATGCCA AGACGCTGCC CTTTGCCGAA
GCCGAACCCG GCGCCACGGG GCTCGAACTG CTGCTGCCGC TGGCGCTGCA GTGGGGCGAG
CGCAGCGGCG CGGGCATCGT GCGCGCGCTG GAGGTCATCA CGTCCGCGCC CGCGCGGCTG
CTGGCCGCCG CCGATGCAGG CACCGGCATC GGCCGGCTGG CCGAGGGCGG CGTGGCCGAC
CTGTGCGTCT TCGATCCGGG CCTCGAATGG CAGGTGCAGC CCGATGCGCT CAAGAGCCAG
GGCAAGCACA CGCCGTTCTC GGGCTATCCG CTGGTGGGGC GCGCGCGCCA CACCCTCGTC
GCGGGCCGCG TGGTCCACGG CTGA
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| Protein sequence | MNILISNGRV VDPASGTDKK TDIAIADGKI AGIGHTPAGF KAERTLDATG CVVAPGLVDL
AARLREPGYE HEGMLESEMA AAIAGGVTSL VCPPDTDPVL DEPGLVEMLK FRAEKLQGAR
LFPLGALTRS LAGGVLTEMA ELTEAGCIGF SQADVPLADT QVLQRALLYA STFGYTVWLR
PQDRDLGKGV AASGPLATRL GLSGVPVSAE TIAIFTIVEL MKSTGARVHL CRISSAAGVA
LVRAAKAQGL PLSCDVSINS LHLADTDIGF FDSRARLNPP LRQQGDRDAL SAALADGTID
ALVSDHTPVE ADAKTLPFAE AEPGATGLEL LLPLALQWGE RSGAGIVRAL EVITSAPARL
LAAADAGTGI GRLAEGGVAD LCVFDPGLEW QVQPDALKSQ GKHTPFSGYP LVGRARHTLV
AGRVVHG
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