| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4598 |
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| Symbol | |
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| ID | 7973296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4876752 |
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| End bp | 4876982 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795182 |
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| Product | DNA binding domain protein, excisionase family |
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| Protein accession | YP_002946469 |
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| Protein GI | 239817559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family
[TIGR03304] outer membrane insertion C-terminal signal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACCC CGACCGAAAG CGTTCTGACT GTTAAGGAGG TCGCCGACTA CCTGCGGGTC
AACCAGCGCA CCGTCTATCG GTTGGCGGTC GAACGTCGTC TACCCGGCTT CAAGGTCGGA
GCGACGTGGC GGTTCAAGCG TGGAGACATC GATGCATGGA TAGCTGCTCA GTCGTCGGCA
ATCGCGTCTC CCGACGCAGC AGCCGCACCG GGCGAGGGCA GGAAAACATG A
|
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| Protein sequence | MSTPTESVLT VKEVADYLRV NQRTVYRLAV ERRLPGFKVG ATWRFKRGDI DAWIAAQSSA
IASPDAAAAP GEGRKT
|
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