| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4586 |
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| Symbol | |
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| ID | 7973284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4855398 |
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| End bp | 4857122 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795171 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946458 |
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| Protein GI | 239817548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGCCG CTCGTGGCCT GCAGACTCTT GCCTACGACT TGGCGGCTGC CATCGGATCG
ATGGGGCTAC AGGCGGGTGG ATTCGGCAAG CCGGAATTGG TAGAGATGCC GACTCGTGAG
GCTGAACGCA TCTTCCAGGG ATATGCGAAG GCCAAACCCA GCAAGGAGGA TGCTTATGCT
GCGGCGAGGG CGTTTCTTCG CGACCAAGAG TTGGACTCGT GGCAGTACGA CCTCATCGCA
GCTGCGGTCG CGGAGCCTGT TCGAGAGCAA GCTGGAGCAA TGGTTCTCGG GTCCACGCGG
TTTCCCGCGC TGATCGCCGG TTACGAGGAG GAGGCAGGCC GTGGCGATCT ATGGCGTCTT
ACCTGGCACG GGCTGCTCTA CTCGTACTTC AATTTCGATC CGAGCGCCAC GAAAGACGAA
GCCTCGCGCA GAGGTTGGGA GGCGCTGCGG GCTTTCTTGG AGCGTACCTG GCCGCTGATC
GACCGGCAAG CCGGCAATGT TCTGGTGCCA GACTGGGTCA GTGTCCTTCG CAAGGAATCC
GAGGTACTGA CAATAAATCC CGCCAACAAG TACGCCCGAG CGTATTTGCG TGGTGACTCG
GCAGCGACGG AGCAACTGGC GGCCGACCTC GGTATTCCTC CGTCGAGTTG GTTCTGGCAC
GCTCTAGTGC TGGGCGCAGT CCGACAAGCG ATCTCAGATA GTGAGGCTGA GTTCCGGCGC
CTCGTTCCGC AGCTACTGCA GCTTATCCAC GGCAGGCCGG CATTTCGCGA TGAGGCGCTC
GAGGCCATTC TTGTTCGGTA CTACGGATGC AAGGGTGCGC CGCAGGATGA GCGCCTTAGG
GACTATGTTT GTGAGCCGAC GGTATGGAAG AACCCAAAGC TCAAGGCGGC GGGTATAGCC
ACAGCGTGGA ATCGTGTGCC CGACCCCGTG TGGCACATGG TCCTCAGCTG GGTCAATGAG
CGCAATCTCA AGGACTTTTT CGATATCCTC GCTGCGCGCA ACAAGGCAGA TGAAGGGCGG
CTGGCTTTCT GGTCGAAGTA CCTCAAGCAG ATCACCTGGA CGCGGCTCGT GTTCGGCGCG
GACACGATGG CGCTCAAGCG TACCAACCAA GGGATCCGCG AGCTCATCGC GCGGGAAGAG
GGCGCGTACG CGCAACTCAC GGGCAAGAGG GAGGTGGACG CTTTCCTGAT GCAAATCGGC
AGCTATCTGA TCATCGAGTT CAGCAAGAAG CCCAATGCTT GCTACGTCTA CCAAGCTGAC
CAACTGCCGT TCGAGCCTTA CGCCCGTCAC TATGACGGGG GATCCGATGA TTTGGCGGCA
GGCTATCGTC AGGATCAAGA GTGTTCGGCC CGCATCGTGC ACCGAGAGGG TTGGGAGGGG
CGGGCGGCCG AGGAGTTGAA GCGGCTGGGC ATTCGGCCGG ACCAACCTGA GGTGCAGAGG
GTGACGCCCA CTCGGACTGC AGGCACGTCG ACTGGGTCGG CCCATACGGT GGACGCATCG
ACGAGGCAGC GAACTACTGC GCAGCGTGAA CCGGACATGG CGATCCTTCG TGCTCTGATC
GGGCGCTTCC GCAACGCATC GATCAACGAC AAGCGCGAGG GCGCAAGCGG TGGACGGCTC
TGGGTGGACG ACCCGCTTCA GCGGGCGTCG TTGGCGACCG AGCTTAGAGC GATGGGCTTC
AGATGGGCCA ATAGCAAGCA AGCATGGTAC TTTCCGGAGA CTTAA
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| Protein sequence | MLAARGLQTL AYDLAAAIGS MGLQAGGFGK PELVEMPTRE AERIFQGYAK AKPSKEDAYA
AARAFLRDQE LDSWQYDLIA AAVAEPVREQ AGAMVLGSTR FPALIAGYEE EAGRGDLWRL
TWHGLLYSYF NFDPSATKDE ASRRGWEALR AFLERTWPLI DRQAGNVLVP DWVSVLRKES
EVLTINPANK YARAYLRGDS AATEQLAADL GIPPSSWFWH ALVLGAVRQA ISDSEAEFRR
LVPQLLQLIH GRPAFRDEAL EAILVRYYGC KGAPQDERLR DYVCEPTVWK NPKLKAAGIA
TAWNRVPDPV WHMVLSWVNE RNLKDFFDIL AARNKADEGR LAFWSKYLKQ ITWTRLVFGA
DTMALKRTNQ GIRELIAREE GAYAQLTGKR EVDAFLMQIG SYLIIEFSKK PNACYVYQAD
QLPFEPYARH YDGGSDDLAA GYRQDQECSA RIVHREGWEG RAAEELKRLG IRPDQPEVQR
VTPTRTAGTS TGSAHTVDAS TRQRTTAQRE PDMAILRALI GRFRNASIND KREGASGGRL
WVDDPLQRAS LATELRAMGF RWANSKQAWY FPET
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