| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4580 |
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| Symbol | |
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| ID | 7973278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4842679 |
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| End bp | 4843968 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644795165 |
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| Product | metallophosphoesterase |
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| Protein accession | YP_002946452 |
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| Protein GI | 239817542 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA AGTTCATTCA CGCGGCAGAT TTGCACATCG ACAGCCCGAT GCGCGGTTTG
AGCGCATATG ACGGAGCGCC GCTGGAGCGA CTTCGGAGTG CCACGAGGCA AACCCTGATA
TCCCTCGTCG ACCTGGCGAT CGAAGAGCAG GTGGCTTTGG TTTTGTATGT GGGGGATATT
TTTGACGGCG ATTGGGCTGA CTTTCACACT GGGCAGTTCT TTCGGGAGCA GAACGTCCGC
TTGGTGCGCG AGGGCATTCG CGTCTACATC GTCAAGGGCA ACCACGACGC GGAAAGCCAG
ATTACCAAGG TGCTGCCCAA GGTCGAAGGC GTTCACATCT TTGACCACAA ACGCTGCGAG
AGTCAGGAGA TCCCTGAGCT GAAAGTCGCG TTGCATGGCC AGAGTTTCAA GCAGCGAGCG
GTGACCGATG ATCTTGCCGC AGACTACCCG GTCGCCAAGG AAGATTGGTT CAACATCGGG
CTTCTGCATA CCTGCCTGAC GCCCGAAACT GCCGGTACTC ATTTACCTTA TGCACCAACT
TCGGTGACGA CCTTGGCCTC TAAGGGCTAT GACTACTTCG CACTGGGACA TGTGCATCAA
CGTCAGGTGG TGCGGGAGGA CAGTCCGCGG ATAGTCTTTC CCGGCAACCT GCAGGGCCGC
CACGCCAATG AGCCCGGCAC GAAGGGCTGC GAATTGGTTA CTGTTCGCGA CGGCCACATC
GAATCCCAGC ACGTGAGCCT TGAGCGCGTG CGCTGGCACC GACTTGCCAT TGATGCGACT
GACTTGGCGA ATGTGGATAT GCTGGCTGTG GCCTGCGCGG CGCAGTTGCA GGCCCAGTTC
TCGGATGCGC CCGAGCCGCT CCACGCCGTG CGTGTGAAGG TGCACGGCCA GTCGGAACTC
GCTCGTATCG AAGCCGCACA ACGTGGAACT GTCGAAGCGG CGGTGCGAGC CGCCGCACAG
GACCTACAGG GCTTGGACGT GTGGATCGAG AAGGTCGAGC TGGAGTTGAG TGCCCCGGTG
GACCGAACGG AGCTGGCACG CCGGGGTGAT GCGCTCAGCG AAGTGGTGCG ATTGGTCGAT
GAATTGGCCG GCGATGATAT TGCGGTGCTG ACATGGGTCC GTGCCGAACT ACAGGACTTG
AAGGAGCTGC CCGTCGAACT TACCAGCCTG GCGCCTGCGA GCTTGGACGC AGATGCGCTG
CGGGAGCTGC TGGCCGATGC TGAGGCTACG GTCCTGGCGA AGATGCCGGT CGGGAAGTCC
GATCAGACAA AACAGGAGAA GGCGACATGA
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| Protein sequence | MDFKFIHAAD LHIDSPMRGL SAYDGAPLER LRSATRQTLI SLVDLAIEEQ VALVLYVGDI
FDGDWADFHT GQFFREQNVR LVREGIRVYI VKGNHDAESQ ITKVLPKVEG VHIFDHKRCE
SQEIPELKVA LHGQSFKQRA VTDDLAADYP VAKEDWFNIG LLHTCLTPET AGTHLPYAPT
SVTTLASKGY DYFALGHVHQ RQVVREDSPR IVFPGNLQGR HANEPGTKGC ELVTVRDGHI
ESQHVSLERV RWHRLAIDAT DLANVDMLAV ACAAQLQAQF SDAPEPLHAV RVKVHGQSEL
ARIEAAQRGT VEAAVRAAAQ DLQGLDVWIE KVELELSAPV DRTELARRGD ALSEVVRLVD
ELAGDDIAVL TWVRAELQDL KELPVELTSL APASLDADAL RELLADAEAT VLAKMPVGKS
DQTKQEKAT
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