| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4569 |
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| Symbol | |
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| ID | 7973267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4824145 |
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| End bp | 4827654 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795154 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_002946441 |
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| Protein GI | 239817531 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCATC ACATCGAACC AGGTCTGTTA GTCCTGCATA GCAACCGAGC CGAATGGCTG
GCAGACGCTG TCTTCCAGTG GATCGCCCGC CAACCGTTGC AGCCGCTGGA GGAGGAGGTA
TTCCTCGTCC AAAGCAATGG TGTTGCTGAA TGGCTCAAGA TGGCAATGGC CACGCACAGG
GGGGTGTGTG CTGCCGCTCG CGTCGAATTG CCCGGCCGTT TCTTGTGGCG AGCGTACCGA
CAGGTGCTGG GCCGCGATGC CGTGCCAGCG CAATCGGTAC TCGACAAGCT ATCGATGACG
TGGCGGTTGA TGGAGCTGCT GCCCGCGGTG ATCCAGCGGG CCGGCTTCGA GCCGTTGGCA
CGCTTTCTTG CCGACGGTGC CGTGCCGCGA CGACTCCAAC TGGCCGAGCG ACTCGCCGAC
CTATACGACC AGTACCAAGT CTACCGTAGC GACTGGCTGA CCGCATGGGA GGCGGGGGCG
GACATCCTTC CGCGCACCGC GACCAGCATC GCAGCCGGTG CACCGCCGCT TGAGGCGGAC
CAGTTGTGGC AGGCCGCCTT GTGGCGCGAA CTGCTCTCTA CCCTGGACGA CGGAGAGCGT
GGTGCCATCC GCTCCCGTTT GCACAGCCGC TTTACCACCG CGCTGCAGAC CCCGACAGGC
CTGGCGATGC CTGTGGCGCG GCGCGTGGTC TTGTTCGGCA TGACCCACGT TCCGATGCAG
ACGCTCGAAG CCCTTTCGGC GCTCGCCACG CATTCGCAAG TGGTGCTGGC CATTCCCAAT
CCGAGTCAAT ATCACTGGGC CGACATCATC GAGGGGCGGG AGCTGCTTCG GATCGAGCGA
CGTCGGCAGC CGCTGCGCAA CGGACAGGAC CTTGCGGCCG TTCCGATGGA GGATATGCAT
GCACACGGCC ATCCTTTGCT GGCCGCGTGG GGCCGGCAGG GGCGCGACTT TGTTCGGCAA
CTCGATGCAT TCGACGATGC GGAGGCTACG CGGCAGCGCT TTGCGGGGCT CAAGATCGAC
CTCTTCGACA CGCAGCCGGG TGTGAGTCTT CTGCAGCAGG TTCAGGCGGG CATCCGGGAC
TTGGAACCTT TGCAGGATCC GCCCCGCGCG TCCGTCCCCG CGACCGATCG GTCAATTGTC
TTTCACGTCG CTCATAGCAC ACAGCGCGAA GTCGAAATCC TGCACGACCA GTTGCTAGCG
TTGCTCGCTG CACCGGTCCG CGGTCCAGAC GCCCCGTCTC TGCAGCCGCG CGATGTCGTA
GTCATGGTGC CGGACATCGC CGCGTTCGCG CCTGCCATCC GATCGGTGTT CGGTCAATAC
CGGCGCGGCG ATCCGCGCTT CATTCCTTTT GATATCGCCG ATTTGCAGGA GCGTGGGAAC
AACCCGGTGC TGGTGGCGAT GGAGTGGCTG CTGCGCCTGC CACAGCAACG TTGCCGCGCG
AGCGAGGTCC GGGATCTACT GGATGTGCCC GCTGTCGCGC AGCGCTTCGA TTTGGACAAC
GCCGACCTGC CACGGCTGGC GCAGTGGATG GAGGGCGCCG GTATTCGCTG GGGTCTGGAT
CTGGCCCACC GCAACGAATT GGAGTTGGCT GCCTGCGGAG AACAGAACAC ATGGATGTTT
GGCCTGCGAC GCATGCTGCT TGGCTTCGCT GGCGGCCCCG GCGCTCGGGC GTTCCAGGGG
GTCGAACCGT ACGCAGAGGT TGGAGGGCTC GAGGCGTCGT TGGCCGGATC GCTGGCTGAC
GTGCTGGACG CACTGGTGCA GTGGTGGCAA GAGGCCGCAT CCGAGGCCAC ACCTGTGCAA
TGGGGGGCGC GCGTGCGGGC GCTGCTCGAT GCCTTCTTCG CCGCCACCAA TGAACGCGAA
CGGATCACGC TGGCCTCGGC TCGCGATGCC TTGCGCGACT GGCTCTCTGC CTGTGACACC
GCCGGCTTCG ACCAATGCGT GCCCCTGGAA GTAGTGCGCG AAGCCTGGCT GACGGGTATT
GACGCACCAA ATCTGCATCG GCGCTTCCGC GCTGGTGGGG TGACCTTCTG CACGTTGTTG
CCTATGCGCG CAGTGCCATT CGAAGTGGTG TGCCTGCTCG GCATGAACGA CGGCGACTAC
CCGCGAAGCA GCACACGCAG CGACTTCGAC CTGATGGGGC TGCCGGGCCA GCGCCGGCCC
GGCGACCGCT CGCGACGGGA CGACGACCGC CAATTGATGC TGGAGGCATT GTTGTCGGCG
CGGCAGGTCT TCTACGTGAG TTGGGTCGGG CGCAGCGTGC GAGATAACAG CGTACAGCCG
CCTTCCGTGC TGGTGTCGCA ACTGCGCGAT TTCCTGCAAG CCAATTGGAG CAGCGACTTG
GCGGCCGCAC GTACCACCGA GCACCCATTG CAGCCTTTCA GCCGTCGCTA CTTCGAGGTG
CCGGCGTTGT CCGATCCTGC AAAGAAGGGG GATGCCCTGT TCACGTTCGC CCGCGAATGG
CGTGCCGCCC ACACGGGCGA TTCGGGCATC GACGTTGCGG AGCCGCGGAT GCCCGTGACT
GACTCACAGG TTGTGCCGCG ATTGACGGTG GCGATGTTGA CCAGTTTTTT GAAGAACCCC
GTCAAGCATT TCTTTCGGCA GCGGCTCAGC GTGGTGTTCG CGGAGGAGGA TCAGGCATCC
GCGGATGACG AGAACTTCGG ACTTGACGGG CTGGAAGAAT ATGGGCTTTT GGCGCAGGTC
GTGGCCGAAA TAGGAGCGGC TTCCCTCCCG GCGCCGGACG ATCCCACCAC GCTCACCGGG
CAAGTGAATG AACTCATGGC TCGCATCAAG CGTGCCGGTC AATTGCCCAT GGCCGAGATC
GGGCGCCGCG CTGAGCAAGG TCTGGTCGAG GCAGCCTTGC CCATGCTCGC GCAGTGGCGT
GCCGTACTGG CCGAGTATCC CGAGCCGGCT GCCAAGGCGC CACTGCGACT CACCGAAGAC
GCGGTGACGA TCGACGACTG GCTGGACGGC CTGCGTAGTG CCCCGCTTAA CGCTGACGCG
CGCATCTGGC TGGAACTCGT GCCGTCGCGT CTGCAAACCA CCGCGAAGAT GCCCGAGCTG
CGCCTTGAGC AACTGATCCA GCCGTGGGTG CGCAGCTTGG TGGCAGGCGC CTGCGGCATT
GCCGCGCATG GCGTGCTGGT TGGGCGTGAC GCGAGTGTGA TCATCACTCC GATGGCTCAG
GAAGCCGCAC GAGCGACGCT TGCCGTTTTG CTAGCAGGCT GGCGCCAGGG TATGACCCAA
CCGCTCCCGG TCGCCTGCCG TACCGCCCTC GCATGGCTCA ACCAAAAGGA TGCGGGCCTG
AACTATGAAG GTAATGGTGA CTTTATGCGG GGCGAGCGCG AGGAAGCGTG CCTGGCGCGC
GAGTACCCCG ATTACGAGGC CCTGACGGCT GATGGTCAGT TTGAACTCTG GGCCGAGCAA
CTCTACGGTC CGGTTGTGCA CTGGATCGCG GCCCACGTGA CCGTCGAATC GCATGTGGCC
GCTCAAACCC GCCGTGAGGT TGCCATCTGA
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| Protein sequence | MTHHIEPGLL VLHSNRAEWL ADAVFQWIAR QPLQPLEEEV FLVQSNGVAE WLKMAMATHR
GVCAAARVEL PGRFLWRAYR QVLGRDAVPA QSVLDKLSMT WRLMELLPAV IQRAGFEPLA
RFLADGAVPR RLQLAERLAD LYDQYQVYRS DWLTAWEAGA DILPRTATSI AAGAPPLEAD
QLWQAALWRE LLSTLDDGER GAIRSRLHSR FTTALQTPTG LAMPVARRVV LFGMTHVPMQ
TLEALSALAT HSQVVLAIPN PSQYHWADII EGRELLRIER RRQPLRNGQD LAAVPMEDMH
AHGHPLLAAW GRQGRDFVRQ LDAFDDAEAT RQRFAGLKID LFDTQPGVSL LQQVQAGIRD
LEPLQDPPRA SVPATDRSIV FHVAHSTQRE VEILHDQLLA LLAAPVRGPD APSLQPRDVV
VMVPDIAAFA PAIRSVFGQY RRGDPRFIPF DIADLQERGN NPVLVAMEWL LRLPQQRCRA
SEVRDLLDVP AVAQRFDLDN ADLPRLAQWM EGAGIRWGLD LAHRNELELA ACGEQNTWMF
GLRRMLLGFA GGPGARAFQG VEPYAEVGGL EASLAGSLAD VLDALVQWWQ EAASEATPVQ
WGARVRALLD AFFAATNERE RITLASARDA LRDWLSACDT AGFDQCVPLE VVREAWLTGI
DAPNLHRRFR AGGVTFCTLL PMRAVPFEVV CLLGMNDGDY PRSSTRSDFD LMGLPGQRRP
GDRSRRDDDR QLMLEALLSA RQVFYVSWVG RSVRDNSVQP PSVLVSQLRD FLQANWSSDL
AAARTTEHPL QPFSRRYFEV PALSDPAKKG DALFTFAREW RAAHTGDSGI DVAEPRMPVT
DSQVVPRLTV AMLTSFLKNP VKHFFRQRLS VVFAEEDQAS ADDENFGLDG LEEYGLLAQV
VAEIGAASLP APDDPTTLTG QVNELMARIK RAGQLPMAEI GRRAEQGLVE AALPMLAQWR
AVLAEYPEPA AKAPLRLTED AVTIDDWLDG LRSAPLNADA RIWLELVPSR LQTTAKMPEL
RLEQLIQPWV RSLVAGACGI AAHGVLVGRD ASVIITPMAQ EAARATLAVL LAGWRQGMTQ
PLPVACRTAL AWLNQKDAGL NYEGNGDFMR GEREEACLAR EYPDYEALTA DGQFELWAEQ
LYGPVVHWIA AHVTVESHVA AQTRREVAI
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