| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4558 |
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| Symbol | |
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| ID | 7973256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4811447 |
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| End bp | 4811986 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795143 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_002946430 |
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| Protein GI | 239817520 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGTGC TCCGCCCTCT TCTTCTGGCC GGCCTGCTGT CGCTGTCGGC GCTGGCCCAG
GCCGCCGAGC GGCGCACGTG TCTGGTGGTC GGCGTCAGCG ACGGCGACAC CATCACCGCG
CGCTGCGGCG CCGCGGGCAA CTACGAGCAG ATCAAGGTGC GCTTCAACGG CATCGACGCG
CCCGAGAAGC GCCAGCCCTT CGGCCAGCGC GCGAAGGAGG CGCTGTCCGA CCTGGTCTAC
ATGAAGGAAG CCGCGCTCGA CTGCCCAAAG TCCGACCGCT ACGGCCGCAG CGTCTGCAAG
GTGATGGTGG CGCCCGCCTC GGCGCCGCGC GGGCCCAAGA CGCTCGATGC GGGCCTGACC
ATGATCACGC TCGGCTTGGC CTGGTGGTAT CGAACCTACG CCCGCGAGCA GACGCCGCAG
GAGCGCGGGC AATACGAATT CGCGGAAGCC GAGGCCAGGG CCAAGCGCGC GGGCCTGTGG
CGGGACCAGG ATCTGGTGGC GCCATGGGAT TGGCGCAAGG CGCAGCGGGC GCAGCACTGA
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| Protein sequence | MSVLRPLLLA GLLSLSALAQ AAERRTCLVV GVSDGDTITA RCGAAGNYEQ IKVRFNGIDA
PEKRQPFGQR AKEALSDLVY MKEAALDCPK SDRYGRSVCK VMVAPASAPR GPKTLDAGLT
MITLGLAWWY RTYAREQTPQ ERGQYEFAEA EARAKRAGLW RDQDLVAPWD WRKAQRAQH
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