| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4533 |
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| Symbol | |
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| ID | 7973231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4792729 |
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| End bp | 4793250 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644795119 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002946406 |
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| Protein GI | 239817496 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCC AGGTGTCAGG TGGAGAGCTG GCGAAGACCT CGGGGATTTC TGCCTCGATG
CTTTCTCGCA TCGAGCGCGG GCTGGTCTCG CCCTCGGTGG AGACGCTGGA GCGTCTCGCG
AATGGTCTTG GGGTGCCGAC GTCGCGGTTC TTCGGGGACC AGGCGCGGCG CACTGACTTT
TGCCATGTGC GTGCAGGACA TGGTGTCTTG GTCGATCGCA TCGGCGCCGT GGCGGACTAC
CGCTATGAGC TGTTGGGCCA CCTGCTGTCG GGCAACCTGT TCGTCGAGCC GTACCTGGTC
ACGTTGCTGC CGGGCGCCGA TCCCTATGTG ACCTTCCAGC ATCCGGGGCT CAAGTTCCTG
TACTTCCTGT CCGGAGAGGT CCTCTACCGC TATGGCGGCA GGACTGCAGA GGTGAGGGCA
GGGGACGCGC TGCTGTTCGA TGCGACCGCA CTGCACGGGA TCGAGGCCAT TCAGACCCAG
CCGGTCTCTT ACCTGTCGGT GGTGTTCACG CTGCGGGAGT AG
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| Protein sequence | MAAQVSGGEL AKTSGISASM LSRIERGLVS PSVETLERLA NGLGVPTSRF FGDQARRTDF
CHVRAGHGVL VDRIGAVADY RYELLGHLLS GNLFVEPYLV TLLPGADPYV TFQHPGLKFL
YFLSGEVLYR YGGRTAEVRA GDALLFDATA LHGIEAIQTQ PVSYLSVVFT LRE
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