| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4528 |
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| Symbol | |
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| ID | 7972817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4788311 |
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| End bp | 4788832 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795114 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002946401 |
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| Protein GI | 239817491 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCG ATGTGTCTGG CGGCGAACTG GCTAAGACCT CGGGAATTTC GGCCTCGATG
CTCTCGCGCA TCGAGCGCGG GCTGGTCTCG CCTTCGGTGG AGACGCTGGA GCGCCTCGCG
CAGGGCCTGC ATGTGCCGAC CTCGCGCTTC TTCAGTGATC AGGCGCGGCG CACGGACTTC
TGCCATGTGC GCGCAGGACA TGGTGTCTTG GTCGATCGCA TCGGGGCGGT GGCGGACTAT
CGCTACGAAC TGCTGGGCCA TCTGCTGTCG GGCAATCTGT TCGTCGAGCC CTACCTGGTC
ACTTTGCTGC CCGGGGCCGA TCCCTACGTG ACCTTCCAGC ATCCGGGCCT CAAGTTCCTG
TACTTCCTGT CCGGGGAGGT CCGCTACCGT TACGGCGGCA GGACTGCGGA GGTGAGGGCA
GGGGACGCGC TGCTGTTCGA TGCGACCGCA CTGCATGGGA TCGAGGCCAT CCAGACCCAG
CCGGTCTCTT ACCTGTCGGT GGTGTTCACG CTGCGAGAGT AG
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| Protein sequence | MAADVSGGEL AKTSGISASM LSRIERGLVS PSVETLERLA QGLHVPTSRF FSDQARRTDF
CHVRAGHGVL VDRIGAVADY RYELLGHLLS GNLFVEPYLV TLLPGADPYV TFQHPGLKFL
YFLSGEVRYR YGGRTAEVRA GDALLFDATA LHGIEAIQTQ PVSYLSVVFT LRE
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