Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4526 |
Symbol | |
ID | 7972815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4785959 |
End bp | 4787065 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644795112 |
Product | hypothetical protein |
Protein accession | YP_002946399 |
Protein GI | 239817489 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAC AGAGGGTGCG CGCAGGCCGA AGCGACCGCG GCCCGGCCGG TGCGCCGCGC GACATGACCC TGGACATCGT GAGCTACGGC CGGCGAGGAC CGGGCGGCCA GCTGCGCTTC GGCGCCGACC AGATCGCGCA GATCCAGCGC ACGGTGGGGC GCACGCCCGA GGTGATGGTG AAGGTCTCCG GCGGCGGACG GGATGTCGGC GGCGTCGAGG CCCATCTGCG CTACATCGGC CGGCACGGCA AGCTGCCGAT CGAAACCGAC GAGGGGCTGA CGCCGCAGGG CCGGGGTGCA GGCAAGGAGA TCGCGGCCGA CTGGCAGCTG GAGCTTTGCA GAAGCCAGTA CAAGCCGAAA CCCGCGCCGG GGCAGAAAGA CACGCGTGCG AAGCTGGTGC ACAACATCGT CCTGTCCATG CCCGCCGGCA CGCCGCCGGA CAAGGTACGG GCGGCCGCCC GCGTCTTTGC GCGCGAGAAC TTCGCGCTGC AGTATCGCTA CGCCATGGTG CTGCACACCG ATCAACCGCA CCCGCATGTG CACCTGGTGG TCAAGTGCGA GCACGAGTTC GAGCCCGGCC AGCGCCTCTA CATCCGAAAG GACACGCTGC GCCAGTGGCG CGAGCAGTTC GCCGCACTGA TGCGAGAGCA GGGCGTGGCG GCCAATGCCA CGCCGCGCCA AGTGCGAGGG CAGACCCGCA AGCCGTACAG GGATGCGATC CATCATCGGC TGCGCGCGTT TCGGGCATTC GGGCAACTGC CCTTGAGCGA CCGAGCCAGG CATCGGTCGC CGAAGACCTC GACCTTCATG CGCGCCAAGC TGGAGAGCCT GCTCCAGGCA CTGAGGTCGG GGCGAGGCGC CGTGGATGAC GGCCAAGAGC AGATGCGAAA CACCCGGCGG GCAGTGGTCG CAGATTGGCG CGCCACAGCA GATGCGCTTC GCAGACGGGG CGAGACAAGT CTTGCCGACC AAGTGGATCA TTTCGTCGCA CGAATGCCGG ACGTGCAGAC CGAAGCGCAG CGATTGGCGG AGCGTTGGAG AGGGGCGGAG AGAAGTCGAG TGCTGGAGCA CGCGAAGGAC CAGCCCATGC TGCCAAAGAT TCGGTGA
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Protein sequence | MPKQRVRAGR SDRGPAGAPR DMTLDIVSYG RRGPGGQLRF GADQIAQIQR TVGRTPEVMV KVSGGGRDVG GVEAHLRYIG RHGKLPIETD EGLTPQGRGA GKEIAADWQL ELCRSQYKPK PAPGQKDTRA KLVHNIVLSM PAGTPPDKVR AAARVFAREN FALQYRYAMV LHTDQPHPHV HLVVKCEHEF EPGQRLYIRK DTLRQWREQF AALMREQGVA ANATPRQVRG QTRKPYRDAI HHRLRAFRAF GQLPLSDRAR HRSPKTSTFM RAKLESLLQA LRSGRGAVDD GQEQMRNTRR AVVADWRATA DALRRRGETS LADQVDHFVA RMPDVQTEAQ RLAERWRGAE RSRVLEHAKD QPMLPKIR
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