Gene Vapar_4526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4526 
Symbol 
ID7972815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4785959 
End bp4787065 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID644795112 
Producthypothetical protein 
Protein accessionYP_002946399 
Protein GI239817489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAC AGAGGGTGCG CGCAGGCCGA AGCGACCGCG GCCCGGCCGG TGCGCCGCGC 
GACATGACCC TGGACATCGT GAGCTACGGC CGGCGAGGAC CGGGCGGCCA GCTGCGCTTC
GGCGCCGACC AGATCGCGCA GATCCAGCGC ACGGTGGGGC GCACGCCCGA GGTGATGGTG
AAGGTCTCCG GCGGCGGACG GGATGTCGGC GGCGTCGAGG CCCATCTGCG CTACATCGGC
CGGCACGGCA AGCTGCCGAT CGAAACCGAC GAGGGGCTGA CGCCGCAGGG CCGGGGTGCA
GGCAAGGAGA TCGCGGCCGA CTGGCAGCTG GAGCTTTGCA GAAGCCAGTA CAAGCCGAAA
CCCGCGCCGG GGCAGAAAGA CACGCGTGCG AAGCTGGTGC ACAACATCGT CCTGTCCATG
CCCGCCGGCA CGCCGCCGGA CAAGGTACGG GCGGCCGCCC GCGTCTTTGC GCGCGAGAAC
TTCGCGCTGC AGTATCGCTA CGCCATGGTG CTGCACACCG ATCAACCGCA CCCGCATGTG
CACCTGGTGG TCAAGTGCGA GCACGAGTTC GAGCCCGGCC AGCGCCTCTA CATCCGAAAG
GACACGCTGC GCCAGTGGCG CGAGCAGTTC GCCGCACTGA TGCGAGAGCA GGGCGTGGCG
GCCAATGCCA CGCCGCGCCA AGTGCGAGGG CAGACCCGCA AGCCGTACAG GGATGCGATC
CATCATCGGC TGCGCGCGTT TCGGGCATTC GGGCAACTGC CCTTGAGCGA CCGAGCCAGG
CATCGGTCGC CGAAGACCTC GACCTTCATG CGCGCCAAGC TGGAGAGCCT GCTCCAGGCA
CTGAGGTCGG GGCGAGGCGC CGTGGATGAC GGCCAAGAGC AGATGCGAAA CACCCGGCGG
GCAGTGGTCG CAGATTGGCG CGCCACAGCA GATGCGCTTC GCAGACGGGG CGAGACAAGT
CTTGCCGACC AAGTGGATCA TTTCGTCGCA CGAATGCCGG ACGTGCAGAC CGAAGCGCAG
CGATTGGCGG AGCGTTGGAG AGGGGCGGAG AGAAGTCGAG TGCTGGAGCA CGCGAAGGAC
CAGCCCATGC TGCCAAAGAT TCGGTGA
 
Protein sequence
MPKQRVRAGR SDRGPAGAPR DMTLDIVSYG RRGPGGQLRF GADQIAQIQR TVGRTPEVMV 
KVSGGGRDVG GVEAHLRYIG RHGKLPIETD EGLTPQGRGA GKEIAADWQL ELCRSQYKPK
PAPGQKDTRA KLVHNIVLSM PAGTPPDKVR AAARVFAREN FALQYRYAMV LHTDQPHPHV
HLVVKCEHEF EPGQRLYIRK DTLRQWREQF AALMREQGVA ANATPRQVRG QTRKPYRDAI
HHRLRAFRAF GQLPLSDRAR HRSPKTSTFM RAKLESLLQA LRSGRGAVDD GQEQMRNTRR
AVVADWRATA DALRRRGETS LADQVDHFVA RMPDVQTEAQ RLAERWRGAE RSRVLEHAKD
QPMLPKIR