| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4520 |
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| Symbol | |
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| ID | 7972809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4768386 |
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| End bp | 4768652 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795106 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_002946393 |
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| Protein GI | 239817483 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTCG ACGCCCACGT AAACCGCCGC GAACTCGGTC CGCAGACCGT CGGTATGCCT
GCATTCTTTC GCATGGCTGA CGTGATTCGC ATCACCGCAC TGAGTCGCGC CACCGTATAC
CGAAGAATTG CCGAAGGCAA GTTCCCGCCT CCCGTGCACC TGGGAGGCCG CGCCTCTGGA
TGGCCGCGTG CAGCGCTTCA GCGCTGGATC GATGATCCGG ACGGCTATTC GAATTCGCCC
ATCACGCATC CGAGTCGAAT GAACTGA
|
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| Protein sequence | MELDAHVNRR ELGPQTVGMP AFFRMADVIR ITALSRATVY RRIAEGKFPP PVHLGGRASG
WPRAALQRWI DDPDGYSNSP ITHPSRMN
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