| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4498 |
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| Symbol | |
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| ID | 7972787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4748063 |
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| End bp | 4749511 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644795088 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_002946375 |
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| Protein GI | 239817465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT TCATCGAAGG CGAAGACCGA CAGCAGGTCG CGCTGTTGCC GGAATGTCTT
GATGACTATA TCGGCGAAGA CAACCCGGTG CGAGTCGTCG ACGCCTTCGT CGAGGAACTT
GATCTTCAGG CACTCGGCTT CAAAGGCGCG GACCCAGCTG CTACCGGTCG GCCTGCGTAC
CACCCGGCGG TGCTTCTCAA GCTCTACATC TACGGCTACC TGAACCGCAT CCAGTCCAGC
CGGCGTCTGG AGCGCGAGGC CCAGCGCAAC GTCGAACTGA TGTGGCTCAC TGGCCGCCTT
GCCCCGGACT TCAAGACCAT TGCCGACTTC CGTCACGACA ACGGCGCGGG CATCCGCAAC
GTCTGCAAGC GCTTCGTGGG CATGTGCCGG GAGCTCAAGC TGTTCACGCA GGCCATCGTG
GCCATCGATG GCAGCAAGTT CAAGGCCGTC AACAGCCGCG ACCGCAATGT CACCCCCGCC
AAGATCGATG CGCGCCAGCG CCAGATCGAA CAGAGCATCC AGCGCTACCT CGACGTGCTG
GAGACGGCGG ATCGCACACA GCCTGCTGAA GTGGAAGCGA AGACCGAACG CCTGCAGGAC
AAGATCCGAA CCCTGCGCGC GCAGATGCGC CAGCTCGACG AGACCCAGGA GCAATTGAAG
AAGCTGCCCG ACGGGCAGAT CTCCACCACC GACCCCGATG CCCGTTCGAT GAACTCGCAG
GCCAAGGGCT CGGGCCTGGT GGGCTACAAC GTGCAGACGG CGGTCGATGC CAAGCACCAT
CTCATCGTGG CACACGAGGT GACGAACATC GGCAACGACC GGGCCCAGTT GAGCAAGATG
GCCAAGGCGG CACGTGAGGC GATGGACACG AAGAAGCTGC AGGCCTTCGC CGACCGTGGC
TACTTCAACG GCACCGAGCT CAAGGCCTGC GAGGACGCGG GCATCACGGC CTTCGTGCCC
AAGCCCATGA CCTCGGGCGC CAAGGCTGCG GGTCGCTTCG ACAAGAGCGA CTTCATCTAC
ATCGCGAAGG ACGATGAGTA CCAGTGCCCT GCGGGCGAGC AGGCCATTTA CCGGTTCAGC
ACGCTGGAGA AGAACGGGCT CAACGCGCAT GTCTACTGGA CCAGCGCCTG CCCCACATGC
GCGATCAAAG ACCAATGCAC GACAGGCGAC TTCCGACGCA TCCGCCGATG GGAACATGAA
GAAGTACTCG AGCGTGTGCA GCAGCGCCTG GACAAGAAGC CCAAGGCCAT GACCTTGCGA
CGGCGCACCG TGGAGCATGT CTTCGGGACG TTGAAGCACT GGATGGGCTC GACGCACTTC
CTGACGAAGA CGCTGGCGCA TGTGGGCACC GAGATGAGCC TGCATGTGCT GGCTTACAAC
CTCAAGCGAG TGATCGCCAT CCTGGGAATG AGAAGAATGA TGAAGGCGGT GCGGCTGGTG
GGGCCATGA
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| Protein sequence | MKRFIEGEDR QQVALLPECL DDYIGEDNPV RVVDAFVEEL DLQALGFKGA DPAATGRPAY
HPAVLLKLYI YGYLNRIQSS RRLEREAQRN VELMWLTGRL APDFKTIADF RHDNGAGIRN
VCKRFVGMCR ELKLFTQAIV AIDGSKFKAV NSRDRNVTPA KIDARQRQIE QSIQRYLDVL
ETADRTQPAE VEAKTERLQD KIRTLRAQMR QLDETQEQLK KLPDGQISTT DPDARSMNSQ
AKGSGLVGYN VQTAVDAKHH LIVAHEVTNI GNDRAQLSKM AKAAREAMDT KKLQAFADRG
YFNGTELKAC EDAGITAFVP KPMTSGAKAA GRFDKSDFIY IAKDDEYQCP AGEQAIYRFS
TLEKNGLNAH VYWTSACPTC AIKDQCTTGD FRRIRRWEHE EVLERVQQRL DKKPKAMTLR
RRTVEHVFGT LKHWMGSTHF LTKTLAHVGT EMSLHVLAYN LKRVIAILGM RRMMKAVRLV
GP
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