| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4481 |
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| Symbol | |
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| ID | 7972769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4730095 |
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| End bp | 4730994 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795070 |
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| Product | succinyl-CoA synthetase subunit alpha |
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| Protein accession | YP_002946358 |
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| Protein GI | 239817448 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATCC TCATCAACAA GCACACCCGC GTCATCACCC AGGGCATCAC GGGAAAGACC
GGCCAGTTCC ACACCGCGAT GTGCCGTGAC TACGCCAACG GCCAGAAGTG CTTCGTCGCC
GGCGTGAACC CCAACAAGGC GGGCAAGTCC TTCGACGGCA TTCCGGTGTT CGGCACCGTC
AAGGAAGCCA AGGCCGAGAC CGGCGCCACC GTCTCCGTGA TCTACGTGCC GCCGCCGTTT
GCCGCCGCGG CCATCGACGA GGCGGTGGAT GCGGGGCTCG ACCTCGTCGT GTGCATCACC
GAAGGCATTC CGGTGCGCGA CATGATCCGC ACCCGCCATC GCATGGAAGG CAGCAAGACC
CTGCTGCTCG GCCCCAACTG CCCGGGCCTC ATCACGCCCG AGGAAATCAA GATCGGGATC
ATGCCCGGCC ACATCCACCA GAAGGGCCGC ATCGGCGTGG TCTCGCGCTC GGGCACCTTG
ACCTACGAGG CCGCGAGCCA GCTCGCGAGC TTCGGCATCG GGCAGTCGAC CGTGGTGGGC
ATCGGCGGCG ATCCGGTGGG CGGGCTGCGG CACATCGACG TGCTGAAGAT GTTCAACGAC
GACCCGCGCA CCGACGCCGT GATCATGGTC GGCGAGATCG GCGGCAGCGA CGAAGAAACC
TGCGCGCGCT GGATCAGCGA GCACATGCGA AAGCCGGTCG TCGGCTTCAT CGCCGGCGCC
AGCGCGCCAC CGGGCAAGCG CATGGGCCAC GCGGGCGCCA TCGTCTCGGG CGGCAAGGGA
ACGGCGCGGG AAAAACTGGC GGTGATGAAG GAATGCGGCA TCCACGTGAC CGACAACCCG
GCCGAGATGG GAAAGCTGCT CGCGTCGCTG GTGATCCCCG ACTACCTGCC CTTCGACTGA
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| Protein sequence | MSILINKHTR VITQGITGKT GQFHTAMCRD YANGQKCFVA GVNPNKAGKS FDGIPVFGTV
KEAKAETGAT VSVIYVPPPF AAAAIDEAVD AGLDLVVCIT EGIPVRDMIR TRHRMEGSKT
LLLGPNCPGL ITPEEIKIGI MPGHIHQKGR IGVVSRSGTL TYEAASQLAS FGIGQSTVVG
IGGDPVGGLR HIDVLKMFND DPRTDAVIMV GEIGGSDEET CARWISEHMR KPVVGFIAGA
SAPPGKRMGH AGAIVSGGKG TAREKLAVMK ECGIHVTDNP AEMGKLLASL VIPDYLPFD
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